Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1163 ATGTTGGAGAAAGTGGAAGGACTTAACATGGAGAGAGTGATAGAGGAATTTGAGAGGGTGACAAAGGATGCTGGGAGGATTCAAAGGGAAACGCTGAAAAGGATTTTGGAAGACAACGCTTCTGCTGAGTACTTACTGAATTTTGGCCTGAATGGGAGGACTGACCCTGAGAGTTTCAAGGCATTTGTTCCACTGGTCACTCACAAGGAATTGGAGCCTTATATCAATAGAATACTTGATGGGGATACTTCTTCTGTTCTAACTGCCAAACCCATCACAACCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAATTTGTACCATGGAATGAGGAATTGTTTGACACCACATTGCATATATATTACACCTCTTTTGCCTTCAGGATCAGGGAATTTCCCATGAACAATGGCAAGGCTTTGGGCTTTGTCTACAGCAGCAAGCAGTTCAGGACCGAAGGGGGTGTGCTAGCAGGAACTGCCACCACCAACGTGTTTCGCAGCCCAAGGTTCAGGAGCACAATGAAGGCCATTCAGTCCCCATTTTGCAGCCCTGATGAAGTTATTTTTGGTCCTGATTTTCACCAATCATTGTACTGCCACCTCCTGTGTGGGCTAATATTCCGGGAGGAAGTTCATATGGTGTCTTCCACATTTGCATACAGCATTGTATCTGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGACATCAAAGAAGGTGTGCTTAACAGCAAGGTCACAGTTCCATCCGTTAGGACAGCCATGTCTAAGCTGCTCAAACCTGACCCTGAGCTGGCCAACTTGATCCACAGTAAGTGCATGGGGCTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTTACGGGATCATGACTGGTTCAATGGAGCCTTATTTGAAGAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACCAATGTGAAACCAAGAGTGCCACCTGAATTGGCCACTTACACTGTTCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCTGGAACAAACTAAGGTAGATCCCAATTTCCTTTGTATGGATCCTAAGCCTGTGGGGCTCACTGATGTGAAGGTTGGCGAGGAGTACGAAATAGTTATCACCAATCCAGCAGGCTTGTACAGGTACCGACTTGGCGATGTGGTGAAGGTTATGGGGTTCTATAACTCAGCTCCAGAGGTGAAGTTTGTTAGGCGCAGCAATCTTCTGCTTAACATCAACATTGACAAGAACACAGAGAAAGATTTGCAGATAGCTGTGGAAGCAGCATCTCATTTGTTGGCAGAGGAGAAATCAGAAGTTATAGACTACACTAGCCACATAGATTTGTCCAAAGAGCCAGGGCATTATGTGATATTCTTGGAAATCAGTGGAGAAGTAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGTTTGGACAAGTCTTTTGTTGATGCAGGTTACACCAGTTCTCGCAAAGTCAACTGCATTGGGGCCCTTGAACTCCGACTTGTGAGGAGAGGAACATTCCAGAAGATTGTCGAGCATTACGTGGCACTTGGATCTGCTGTGAATCAGTTCAAGACACCAAGATACGTAGGCCCTACAAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTGAAGAACTATCTCAGTACTGCCTTCAATTGA 1749 0.4511 MLEKVEGLNMERVIEEFERVTKDAGRIQRETLKRILEDNASAEYLLNFGLNGRTDPESFKAFVPLVTHKELEPYINRILDGDTSSVLTAKPITTMSLSSGTTQGKPKFVPWNEELFDTTLHIYYTSFAFRIREFPMNNGKALGFVYSSKQFRTEGGVLAGTATTNVFRSPRFRSTMKAIQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVHMVSSTFAYSIVSAFRTFEQVWEELCVDIKEGVLNSKVTVPSVRTAMSKLLKPDPELANLIHSKCMGLSNWYGLIPELFPNVKYVYGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIGTNVKPRVPPELATYTVLPQIGYFEFIPLRELEQTKVDPNFLCMDPKPVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFYNSAPEVKFVRRSNLLLNINIDKNTEKDLQIAVEAASHLLAEEKSEVIDYTSHIDLSKEPGHYVIFLEISGEVSEEVLGGCCNCLDKSFVDAGYTSSRKVNCIGALELRLVRRGTFQKIVEHYVALGSAVNQFKTPRYVGPTNTKVLQILNENVVKNYLSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1163 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Pvu10g1163 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Pvu10g1163 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1163 Pvu-Chr10 37505751 37510675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1163 17 579 EF-hand Containing Proteins AT1G23160 38.185 2.30e-131 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1163 K14506 - gmx:100813492 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1163 10 37505751 37510675 Pvu10g1163 10 37505751 37510675 ECH
Pvu6g1163 6 22669612 22673787 Pvu10g1163 10 37505751 37510675 PCT