Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1145 ATGGCTGGAGAAACATCTTGGATAAGCCACTATGATGACAGACAGAGGGAGAGTGGAGTGTTTGATTCATTTTTAGAACTTGGTGAGGAAGGAGACAAAGATGCAACTGCTGTTTCTTTGGATGTCATTTTGCCTGATGACTTGTTGGAACGAATCCTAGCCTATCTACCCATTGCAAGCATTTTTAGAGCCGGTTGTGTGTCTAAGAGATGGCATGAAAGTGTTAATTCAGAGAGGTTTTTATGGAACCTTTCACATGTTCTACCGCAGAAACCATGGTATTTTATGTTTACAAGCTCTGATGAACCAATTGGTTATGCTTTTGATCCTGTTTTTCGTAAATGGTATAGCATAGAACTTCCATGCATTGGAACATCAAATTGGTTCATTGCTTCATCAATTGGCATGGTCTGCTTCATGGACAACGACAGCAGAAGTGAATTATGCATCTGCAATCCAATTACCAAAACCTACAGGAAGCTGGAGGAGCCTCTTGGTTTGAAATTTTCTGATTACAGTGCATTAGCAATCTCAGTGAACAGAGAATCTCACATTTATTCTGTGGCAATTGTAAAATCTAAACAAGTTCCGGAGAACTTTTTCCAGTGGGACATCTCAATTCATGTATACAATTCAGTAAACACAACCTGGGTGACCACTTTAACTGAAGTTTTGATGGGGTGGAGAGGTGGTGATGAGAGTGTTATATGCAATGGGATGCTATACTTTTTAGTTTATTCAACTGGGGGTGGCCAACCAGAAAATCGTCATGCCCTAATTGCATACAACATGTCTAACCGTTCTTCTCAATGTAGCTTGACAAGGAGCTTTATTCCAGTACCTTGTTCTCTAACTTGTGGCCGTCTGATGAATCTGAAGGAGAAACTTGTAATGGTGGGAGGAATTGGCAAACCAGATCGACCTGACATAATAAAAGGAATTGGTATCTGGCTTCTAAATGATAAGAGGTGGGAAGAAATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTTGATGATGTTTTTGCTAGCAGTGGTGCAGATGATCTGATATATATTCAGAGTTATGGAGCTCCGGCGCTTCTCATATTTGACACGAGCCATAAACAATGGAAATGGTCTCAGAAGTGCCCTGTGACAAAACGGTTCCCGCTGCAGCTTTTTACTGGCTTTTGCTTTGAGCCTAGACTTGAAATAGCTCCGTAG 1215 0.4123 MAGETSWISHYDDRQRESGVFDSFLELGEEGDKDATAVSLDVILPDDLLERILAYLPIASIFRAGCVSKRWHESVNSERFLWNLSHVLPQKPWYFMFTSSDEPIGYAFDPVFRKWYSIELPCIGTSNWFIASSIGMVCFMDNDSRSELCICNPITKTYRKLEEPLGLKFSDYSALAISVNRESHIYSVAIVKSKQVPENFFQWDISIHVYNSVNTTWVTTLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQPENRHALIAYNMSNRSSQCSLTRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKRWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGAPALLIFDTSHKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1145 404 Gene3D - 90 393 IPR015915 GO:0005515
Pvu6g1145 404 PANTHER OS02G0260200 PROTEIN 2 403 - -
Pvu6g1145 404 Gene3D - 43 82 - -
Pvu6g1145 404 SUPERFAMILY F-box domain 42 119 IPR036047 GO:0005515
Pvu6g1145 404 SUPERFAMILY Galactose oxidase, central domain 97 382 IPR011043 -
Pvu6g1145 404 Pfam F-box-like 44 83 IPR001810 GO:0005515
Pvu6g1145 404 ProSiteProfiles F-box domain profile. 44 84 IPR001810 GO:0005515
Pvu6g1145 404 PANTHER F-BOX FAMILY PROTEIN 2 403 IPR045048 -
Pvu6g1145 404 SMART fbox_2 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1145 Pvu-Chr6 22545174 22549001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1145 - - gmx:100817678 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1145 6 22545174 22549001 Pvu10g1125 10 36808266 36811165 PCT