Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1125 ATGGCGGGAGACTCATCATGGATAAGCCACTTAGATGATGGAGCACGTGGGGAGACTAGGGAGTTTGATTCAGTTTTGGAATTTGGTGAGGAAGTTGATACCGAGGGAACTGCTGTTTCTGTGAACACCGTGTTACCTGATGAATTGGTGGAGCGAATCCTAGCCTATCTCCCCATTGTAAGCATTTTCAGAGCAAGTTCTGTGTGTAAAAGATGGCATGAGATTGTTACTTCTGAAAGGTTTCTATGGAACCCTTCCAATTCATTGCCACAGAGACCTTGGTACTTTATGTTCACTTACTCAGATGAACCAACTGGTTATGCTTATGATCCCATCCTTCGGAAATGGTACGGCATTGAGCTTCCCTTCATCGAAACATCTAGCTGGTTCGTTGTTTCTTCTTATGGTTTAGTTTGCTTCATGGACAATGACAGCAGAAGCAAATTATGCATGTGTAACCCTATTACGAAAAGGTGCAGAAGGCTTGAGGGTCCTCCGGGTTTGAAATTTTCTGATTACAGTGCATTGGCAATGTCTGTGAACAGGAAATCCCACAGTTACACTCTGGCAATGGTGAAATCAAAACAAATCCCTGAGGATTTTGTCCAGTGGGAGATCTCAATTCATATATACCGCTCACAGAAAGAGACCTGGATGACAACTTCAACAGAGGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGGTGTATTATACTTTTTAGTCTACTCAGCTGGGGGTATTCCTTCAGAAAGTAGGCATGCACTGATTGCATATAATATCTCTAATCTCACTTCTCAAGCTACCTTGCGAAGGAGCTTTATTGCTGCACCCTGTTCACTAACATGTGGCCGTTTGATGAATATGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGTAAGCCAGATCGACCTGACATAATAAAAGGAATTGGCATCTGGGTTCTTAACGATAGGAAGTGGGAAGAGATTGTCCGAATGCCCCACAAATACTTCCAAGGATTTGGGGAGTTTGATGATGTTTTTGCTAGCAGTGGTACTGATGATCAAATATATATTCAAAGTTATGGATCTCCAGCACTCCTCACATTTGATATGTATCTTAAACAGTGGAAATGGTCACAGAAATGCCCTGTAACAAAGAGGTTCCCTCTACAGCTATTCACTGGTTTTTGCTTTGAGCCTAGGCTTGAAATTGCTCCATAG 1218 0.4261 MAGDSSWISHLDDGARGETREFDSVLEFGEEVDTEGTAVSVNTVLPDELVERILAYLPIVSIFRASSVCKRWHEIVTSERFLWNPSNSLPQRPWYFMFTYSDEPTGYAYDPILRKWYGIELPFIETSSWFVVSSYGLVCFMDNDSRSKLCMCNPITKRCRRLEGPPGLKFSDYSALAMSVNRKSHSYTLAMVKSKQIPEDFVQWEISIHIYRSQKETWMTTSTEVLMGWRGGNESVICNGVLYFLVYSAGGIPSESRHALIAYNISNLTSQATLRRSFIAAPCSLTCGRLMNMKEKLVMVGGIGKPDRPDIIKGIGIWVLNDRKWEEIVRMPHKYFQGFGEFDDVFASSGTDDQIYIQSYGSPALLTFDMYLKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1125 405 Gene3D - 37 85 - -
Pvu10g1125 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Pvu10g1125 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Pvu10g1125 405 PANTHER OS02G0260200 PROTEIN 1 404 - -
Pvu10g1125 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 336 IPR017451 -
Pvu10g1125 405 SUPERFAMILY F-box domain 43 144 IPR036047 GO:0005515
Pvu10g1125 405 PANTHER F-BOX FAMILY PROTEIN 1 404 IPR045048 -
Pvu10g1125 405 SUPERFAMILY Galactose oxidase, central domain 106 382 IPR011043 -
Pvu10g1125 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1125 Pvu-Chr10 36808266 36811165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1125 - - gmx:100817678 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1125 10 36808266 36811165 Pvu10g1125 10 36808266 36811165 ECH
Pvu6g1145 6 22545174 22549001 Pvu10g1125 10 36808266 36811165 PCT