Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0619 ATGGGTGGTGGAAATCAAGAGGCTGTCAAGCAGTTGCAGTCCCTGATGGAAAATGTGGATGAACAGCTGAAGAACGCATTCCAGAACATGCACCAAGATTATCCAGCTGAAACATTACTACGGTTTCTCAAAGCAAGGGATTTGAATGTTGCCAAAGCCCATAAAATGTTAATTGATTGTTTGAACTGGAGAGTGGAAAATGAGATTGACAAAGTTTTAACGAAGCCTATTCCTGCGGATTTGTATAGAGACATACGGGATTCTCAACTCATAGGAATGTCTGGTTACTCAAAGGAGGGTCTACCGGTCATTGCTGTTGGTGTTGGGCTCAGTACATATGATAAAGCTTCTGACAAATATTATATACAGTCACACATTCAAATCAATGAATATAGGGATCGAGTGATCTTGCCAACAGCTACGAGGAAGCATGAACGATACATTGGCACTTGTTTGAAAGTCTTGGATATGACTGGTTTAAAGTTTTCAGCTCTGAGCCAATTGAGGTTGTTGACTGCTATATCCACAATAGATGACTTAAACTACCCGGAAAAGACAGACACATACTATATTGTTAATGCACCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAGGAAAATCCAGGTACTGCAAGGTTGTGGGAAGGAGGAATTACTGAAGGTAATGGACTATGCATCCCTCCCACACTTCTGCAGAAAAGAAGATTCCAAGTCATCCAAACATAATGCATCAGGAAACACTGAAAATTGTTTCTCCTTCAATCATGTTTTCCACCAGCAACTCTACAATCATATTAAGCATCAAGCTATCATCATGGAGTCAATCTCACCTCCAATCAGACAAGGGTCGTTCTATGTGGACATTCCAGAGCCAGACCCGGATGATGCCAAAATAGCCAAAACCATAGAAACTGAGTTCCACAAATTGGAGAATCAGAAAAATGGCTTTACCAACACACGAAATGGTGTTACAGTCAATGGCCATCGAAATACAAGCTATTAA 1032 0.406 MGGGNQEAVKQLQSLMENVDEQLKNAFQNMHQDYPAETLLRFLKARDLNVAKAHKMLIDCLNWRVENEIDKVLTKPIPADLYRDIRDSQLIGMSGYSKEGLPVIAVGVGLSTYDKASDKYYIQSHIQINEYRDRVILPTATRKHERYIGTCLKVLDMTGLKFSALSQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRRKIQVLQGCGKEELLKVMDYASLPHFCRKEDSKSSKHNASGNTENCFSFNHVFHQQLYNHIKHQAIIMESISPPIRQGSFYVDIPEPDPDDAKIAKTIETEFHKLENQKNGFTNTRNGVTVNGHRNTSY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0619 343 CDD SEC14 82 240 IPR001251 -
Pvu6g0619 343 SUPERFAMILY CRAL/TRIO N-terminal domain 18 75 IPR036273 -
Pvu6g0619 343 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Pvu6g0619 343 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Pvu6g0619 343 PANTHER OS09G0258000 PROTEIN 1 337 - -
Pvu6g0619 343 Coils Coil 5 29 - -
Pvu6g0619 343 MobiDBLite consensus disorder prediction 324 343 - -
Pvu6g0619 343 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Pvu6g0619 343 PANTHER - 1 337 - -
Pvu6g0619 343 SMART sec14_4 85 246 IPR001251 -
Pvu6g0619 343 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Pvu6g0619 343 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Pvu6g0619 343 Gene3D - 4 278 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0619 Pvu-Chr6 17576670 17582274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0619 29 323 Acyl Lipid Metabolism Gene Families AT1G55840 68.581 6.34e-159 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0619 - - gmx:100817955 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0619 6 17576670 17582274 Pvu8g2890 8 58678348 58682083 PCT