Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0038 ATGTTTTTTTTTTCTTATGTTTCAGATGCTATGTATCATGGAAGGGCTATATTAAGGGGTCACAGAATCCATAGAAGCACCCTCATCAAATCCTCCAAGAAGCTGAAAATGAAATCTTTAAAACGTTTGAGCAAGTATTCATCATTTGATTCATTTGGGTTCTCAGATTTTGATTCATATGGCTCTCCTTCTTCCCTACCCTTGCCACCTTACAATTCACTACCACCATCGTCAAGCTCCACTGCTCCTCCATTGGCACCTCCAACCACAGGTGGCGTTGGCAACCCTAATCTCCCAGCATTTTCACCTCTTCCAAGCCCACCTTATCATGGGCCCCCAAGCCCAAGAAGCATTGTTGCTTCTTCACCACCACCACCATCTCCTTATTCTTCTTCAAGCCCACCAAAGCATTCTCCAAGCCCACCAGGCCCACCAAAGAGTGTTCCAAGTCAAAGCCCACCACCACTGGTGTACCTACCTCCTGTGGTGTTCCCACCACCCCCTTCACCCTCCACGCACCGCAAAAAGCCCCCACAGTACGCCCTTTGGTGTGTGGCAAAGCCCACGGTTCCAGACCCGATCATTCAGGAGGCCATGGACTATGCCTGTGGGTCTGGAGCAGATTGCAAATCAATTCAGCCCAATGGGCTCTGCTTCCAGCCCAACACTCTACTGTCCCATGCTTCCTTTGCCTTCAATAGTTACTGGCAGAACACTAAGATTGGTGGAGGGACTTGTGACTTTGGTGGAACTGCCATGCTCGTCACGGTTGATCCAAGCTACGACAAATGCAACTTCATGTTGACTTAG 810 0.4901 MFFFSYVSDAMYHGRAILRGHRIHRSTLIKSSKKLKMKSLKRLSKYSSFDSFGFSDFDSYGSPSSLPLPPYNSLPPSSSSTAPPLAPPTTGGVGNPNLPAFSPLPSPPYHGPPSPRSIVASSPPPPSPYSSSSPPKHSPSPPGPPKSVPSQSPPPLVYLPPVVFPPPPSPSTHRKKPPQYALWCVAKPTVPDPIIQEAMDYACGSGADCKSIQPNGLCFQPNTLLSHASFAFNSYWQNTKIGGGTCDFGGTAMLVTVDPSYDKCNFMLT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0038 269 MobiDBLite consensus disorder prediction 100 154 - -
Pvu6g0038 269 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 22 268 - -
Pvu6g0038 269 MobiDBLite consensus disorder prediction 68 83 - -
Pvu6g0038 269 MobiDBLite consensus disorder prediction 68 154 - -
Pvu6g0038 269 Pfam X8 domain 182 253 IPR012946 -
Pvu6g0038 269 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 268 IPR044965 GO:0004553|GO:0005975
Pvu6g0038 269 SMART X8_cls 182 266 IPR012946 -
Pvu6g0038 269 Gene3D - 179 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0038 Pvu-Chr6 1406616 1408098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0038 183 266 Glycoside Hydrolase AT4G26830 52.941 1.98e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0038 - - pvu:PHAVU_006G003800g 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0038 6 1406616 1408098 Pvu6g0038 6 1406616 1408098 ECH
Pvu6g0038 6 1406616 1408098 Pvu8g2208 8 52503001 52505569 PCT