Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1842 ATGCTTGGTTTCGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTACTTGCTTTTCTTTTCCACCAGGGAGTGTTGGATGAGCAATTTTTGCAGCTTCAGCAGCTGCAAGACGAGGCCTCGCCCAACTTCGTCTCTGAGGTTGTGAACATTTATTTTCACGAGTCCGAGAAGCTGCTCAACAATCTGAGAGGATTGCTAATGGAAAGGGAGTTATCAGACTACAAGAAAATGGGAATCCATTTGAACCAGTTCATGGGAAGCAGCTCAAGCATTGGTGCCAAGAGAGTCACAAACATTTGCATTGCCTTTCGTGCTGCCACAGACCAGAGCAACCGTGGAGGATGCTTGCGAGCTTTGGAGATGCTAGAGCACGAATATTGCTATCTCAAGAACAAGTTGCATGAACTGTTCCAAATAGAGCAGCAACGTGCTTTGGTAGCTGGAGTGAGATACCCTGTGCAGAATCAATAG 474 0.4768 MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDEASPNFVSEVVNIYFHESEKLLNNLRGLLMERELSDYKKMGIHLNQFMGSSSSIGAKRVTNICIAFRAATDQSNRGGCLRALEMLEHEYCYLKNKLHELFQIEQQRALVAGVRYPVQNQ* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1842 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Pvu5g1842 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Pvu5g1842 157 Gene3D HPT domain 5 155 IPR036641 GO:0000160
Pvu5g1842 157 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Pvu5g1842 157 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1842 Pvu-Chr5 40070379 40071717 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1842 K14490 - gmx:100814937 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1842 5 40070379 40071717 Pvu5g1842 5 40070379 40071717 ECH
Pvu5g1842 5 40070379 40071717 Pvu10g1619 10 42473457 42476646 PCT