Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1619 ATGACAGCCTTGTTCAACGGGCGTTATTATCTTCAAACTTCAAACTTCTCTTCTTTTTCTCTATGCCCTGATTTCGATGTACCATCACCCTCACTCTCCCTACCTACAAGGCTTTTCTTTCTTTTCCTTTTCCTTTTCATTTGCCTCGGGAAAGTGGAAAAAGGTTTCAAACCTCATCAGAAAGAGGCTGCAAAGACGCAGCATTTAGCAGAAGACAGGCGCATGCCAAGTGACCGTGAACTGATAGAGTCAGCCAAAACGGGTCTGCCACTGTGGATGCTTGGTTTGGGTGCCGACCTCTTGTGGGCCGACATGAACCGTCTCCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGTCCTCCCCAAACTTCGTATCCGAGGTTGTCAACATCTACTTCCATGAATCCGAAAAGCTTCTCACCAATCTCAGAGCTTTGCTAATGGAGAGAGAGTTTTGGGACTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGTAGCTCCAGCATTGGCGCCAAGAGAGTTAGAAACGTTTGCGTGGCCTTTCGTGCTGCTACTGACCAGAATAACCGTGCTGGTTGCTTGCGAGCTTTGGAGATGCTGGAGCATGAGTACTGCTATCTCAAGAACAAATTGCACGAACTGTTCCAAATTGAGCAGCAACGTGCTTTGGCTGCAGGAGTTAGGTACCCAGTGCAGAATTAG 747 0.4752 MTALFNGRYYLQTSNFSSFSLCPDFDVPSPSLSLPTRLFFLFLFLFICLGKVEKGFKPHQKEAAKTQHLAEDRRMPSDRELIESAKTGLPLWMLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDESSPNFVSEVVNIYFHESEKLLTNLRALLMEREFWDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAATDQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1619 248 PANTHER - 93 244 IPR045871 GO:0000160|GO:0009927|GO:0043424
Pvu10g1619 248 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 133 229 IPR008207 GO:0000160
Pvu10g1619 248 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 93 244 - -
Pvu10g1619 248 Pfam Hpt domain 139 208 IPR008207 GO:0000160
Pvu10g1619 248 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 101 235 IPR036641 GO:0000160
Pvu10g1619 248 Gene3D HPT domain 96 248 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1619 Pvu-Chr10 42473457 42476646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1619 K14490 - gmx:100789608 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1619 10 42473457 42476646 Pvu10g1619 10 42473457 42476646 ECH
Pvu5g1842 5 40070379 40071717 Pvu10g1619 10 42473457 42476646 PCT