Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1841 ATGGCTTCTGGCGCTGCTGCGGAGAACATGAACGATGTGGGACCTGGCTACGTCTTCAAAGAAGAGATTCATCTCACCGTCCTCAAAACCTCTCTGTTCTTCGCCGGCGACGGCTTCACCGTCTACGACTGCAAAGGCGAACTCGTCTTCCGAGTTGACTCGTACGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGCTGTCTCCTCACTGTTCGTCGAAAGAGGCCGAGTTTGCATCAACGGTGGGAGGGCTTCAAGGGGGAGAGAATGGACGGTGATAAACCTATCTTCAGCGTGAAGCGAGCGTCGATCATTGGACGGGCGCGTGCGAGTTTGACGGTGGAGATGTACGATAGCCCCGGTGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGATGCTGCACGGTCTTCAACGTGACGAAGGAATCTGTGGCTGAGATTCGACGGAAGGTGGACCCCACCACTAGCGTTGTGCTTGGTAGGGAAGTGTTCTCTCTTTGTGTGAAGGCTGGGTTTGACGCGGCTTTTGCCATGGGATTTGTGCTGGTTCTCGATCAGATCAACGGCGAGGACTACGTTGACAGTGGTGCGACCACGGAGCCTGCGGTGCACCCGGCCACAGAGGATTGA 654 0.5627 MASGAAAENMNDVGPGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGELVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRARASLTVEMYDSPGEEYQIEGCFSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGREVFSLCVKAGFDAAFAMGFVLVLDQINGEDYVDSGATTEPAVHPATED* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1841 217 SUPERFAMILY Tubby C-terminal domain-like 13 196 IPR025659 -
Pvu5g1841 217 Gene3D - 13 201 IPR038595 -
Pvu5g1841 217 PANTHER - 14 206 IPR007612 -
Pvu5g1841 217 Pfam LURP-one-related 13 191 IPR007612 -
Pvu5g1841 217 PANTHER LURP-ONE-LIKE PROTEIN 14 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1841 Pvu-Chr5 40064295 40065638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1841 - - gmx:100527456 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1841 5 40064295 40065638 Pvu5g1841 5 40064295 40065638 ECH
Pvu5g1841 5 40064295 40065638 Pvu10g1618 10 42460710 42462197 PCT