Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1618 ATGAGAGAGGAGTTGGTGGTGCAAGAAGGGTACGTTACCAACGAAGAGAGGCACCTCACAGTGCTCAAAACCTCTCTCTTCTTCAACGGCGATGGCTTCGCCGTCTACGATTCCAAGGGTCAACTCGTTTTCCGATTCGACTCCTATGGTCCACGCTCACGCGACAAAGACGAGCTTGTTCTCATGGATCCCGGCGGCCGTTCTCTTCTCACTCTACGCCGGAAGAAACCGAGTCTTCATCAACGGTGGGAAGGGTTCAGAGGGGAGAGAAGGGAAGGAGATAGAGCTGTTTTCAGCGTGAAGAGATCGTCGATCATCGGACGGTCGAGGACGAGCGTGGCGGTGGAGGTGTACGATAGGGCGGGTGTGGAGTACCTGATCGAAGGGTGTTTCCCGCAGCGGCGGTGCAAGGTAGTGAATGCGGCGAAGGAAACAGTGGCTGAGATTCGTCGCAAGGTGGACCCCACCACGAGCGTTATGCTGGGGAAGGAAGTGTTTCTGCTTTGCGTAAAGAGTGGTTTTGATGCGGCCTTTGCCATGGGATTGGTGATGGTGCTTGATGAGATGAACGGTGAAGATTACTTTGACGGTAGAATAGAGGAGGCTGTGGTGCACTCCGGCGCAGTGGATCCGCGACCAGTCACGGCGGCGCTTCCCGTCTGA 663 0.5566 MREELVVQEGYVTNEERHLTVLKTSLFFNGDGFAVYDSKGQLVFRFDSYGPRSRDKDELVLMDPGGRSLLTLRRKKPSLHQRWEGFRGERREGDRAVFSVKRSSIIGRSRTSVAVEVYDRAGVEYLIEGCFPQRRCKVVNAAKETVAEIRRKVDPTTSVMLGKEVFLLCVKSGFDAAFAMGLVMVLDEMNGEDYFDGRIEEAVVHSGAVDPRPVTAALPV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1618 220 PANTHER - 12 203 IPR007612 -
Pvu10g1618 220 Gene3D - 4 194 IPR038595 -
Pvu10g1618 220 Pfam LURP-one-related 6 185 IPR007612 -
Pvu10g1618 220 PANTHER LURP-ONE-LIKE PROTEIN 12 203 - -
Pvu10g1618 220 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1618 Pvu-Chr10 42460710 42462197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1618 - - gmx:100783735 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1618 10 42460710 42462197 Pvu10g1618 10 42460710 42462197 ECH
Pvu5g1841 5 40064295 40065638 Pvu10g1618 10 42460710 42462197 PCT