Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1840 ATGCTTAGACCACATACCACGCTTCTGCTCTTCTTCTTTCTACTATTTTCTCTTGTTTTAGGGGATAAAGCATTTACGGGAACATATGGTGTAAACTATGGTAGGATAGCTAATAACCTTCCTCCCCCAGAAAGTGTGGTTACCTTACTGAAAGCAGCAAAAATCAAGAACATCAGAATATATGATGCTGATCACCAAGTTCTCCGTGCCTTCAAAGGCTCTGGCATTGAAATTGTGGTTGGGATTGGCAATGAATTTCTCACTGACATGAGTGTGGGAGAGGACAGAGCCATGACTTGGGTCAAAGAAAACGTTCAGCAGTTTCTTCCAGGAACCAAAATTCGTGGAATTGCAGTGGGAAATGAGATCTTGGGAGGCTCAGACAAAACCCTCTGGGAAGTTCTGCTACCTGCAGCAAAGAATGTTCACAATGCTCTTAGCAAGCTTGGTCTAGCAAAAAGTGTTCAAGTTTCAAGTCCACATTCTGAGGCTGTTTTTGCTACCTCTTTTCCTCCATCATCATGCACTTTCAAGGAAGATATTCTTCCATATATGAAGCCTCTCTTGCAATTCTTCTCACAAATTGGCACCCCTTTTTTCATAAATGCATATCCCTTCCTTGCCTACAAGAATGATCCACAGCACATTGATCTTAACTATGCTCTCATGGAGAAAAATCCAGGGATTTATGATGCAAAGACAAAGCTGCATTATGGTAACATGTTTGAGGCTCAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGGTTGGTTTTGAGAAGATGGAAGTGATTGTTTCTGAGACTGGTTGGGCTTCTCGTGGAGATGATGATGAAGCTGGTGCAACAGTGAAGAATGCAAGGACCTATAATCTTAATCTGCGTAAACGATTGCTGAAGAAGAAAGGAACCCCTTATAGGCCAAAAATGGTGGCGAAAGCTTATATCTTTGCTCTGTTCAATGAAAATTCGAAACCTGGTCCCACATCGGAGAGAAACTTTGGACTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTACCATCTTCTGCAACTTCATCTTTTATTTCCTTCAAGGGTGCTGGAACCTCGTTTGTGCTGGCTTTTACTATGGTTGTTTTTGTTTTGTAG 1146 0.4197 MLRPHTTLLLFFFLLFSLVLGDKAFTGTYGVNYGRIANNLPPPESVVTLLKAAKIKNIRIYDADHQVLRAFKGSGIEIVVGIGNEFLTDMSVGEDRAMTWVKENVQQFLPGTKIRGIAVGNEILGGSDKTLWEVLLPAAKNVHNALSKLGLAKSVQVSSPHSEAVFATSFPPSSCTFKEDILPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALMEKNPGIYDAKTKLHYGNMFEAQVDAAYAALEKVGFEKMEVIVSETGWASRGDDDEAGATVKNARTYNLNLRKRLLKKKGTPYRPKMVAKAYIFALFNENSKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSSFISFKGAGTSFVLAFTMVVFVL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1840 381 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 7 376 - -
Pvu5g1840 381 Gene3D Glycosidases 28 351 - -
Pvu5g1840 381 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 376 IPR044965 GO:0004553|GO:0005975
Pvu5g1840 381 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Pvu5g1840 381 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1840 Pvu-Chr5 40059652 40062051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1840 24 357 Glycoside Hydrolase AT3G15800 75.224 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1840 - - gmx:100815468 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1840 5 40059652 40062051 Pvu5g1840 5 40059652 40062051 ECH
Pvu5g1840 5 40059652 40062051 Pvu10g1616 10 42453400 42455056 PCT