Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1616 ATGTTCTCTTACTCAACTTCCTTCTTTCTTTCCCTTCTCTTCTTCTCTGTAACACTTTCTCATGTTGTGGGGGATAAAATATTTACTGGTACATATGGAGTAAACTATGGTAGGATTGCAGACAATCTACCTTCTCCTGAGAGTGTGGTCACCCTTCTGAAAGCTTCCAAGATCAGGAACATCAGAATATATGATGCTGATCATCAAGTGCTGAGTGCCTTCAAAGGGTCAGGGATTGGAATCATTATTGGGCTACCAAATGAGTTTCTGAGAGACATAAGTCAGGGGGAGGATCGTGCCATGAATTGGATCAAAGAAAATGTTCAGCAGTTTCTTCCAGGAACCAGAATCCGTGGCATTGCTGTGGGGAATGAAATTCTAGGAGGAGGAGATATGGGGCTGTGGCAAGTTTTGCTGCCAGCAGCAAAAAATGTGTACACTGCTCTGTCTAGGCTCAATCTGGCACACCAAATTCAAGTTTCAAGTCCTCATTCTGAGGCTGTTTTTGCAAATTCCTACCCTCCATCTGCATGCACTTTTAGGGATGATGTGCTCCCTTTCATGAAGCCCCTTTTGCAATTCTTCTCACAAATTGGCACTCCTTTCTACATAAATGCATACCCCTTTTTGGCCTATAAAAATGACCCCCAACACATTGACATAAACTATGCTCTCTTCAAGAAAAATGCAGGGATTTATGATGCCAAGACAAAGCTGCACTATGACAACATGTTCATGGCTCAAATTGATGCAGCTTATGCAGCCTTGGAGAAGGTTGGGTTTGAGAAGATGGAGGTGATTGTTTCTGAGACTGGTTGGGCCTCTCGTGGGGATGACAATGAAGCTGGTGCAACAGTGAAAAATGCAAAGACTTACAATAAGAACTTGAAAAAGCTCTTGCTCAAGAAAAAGGGCACCCCTTATAGGCCTAAGATGGTTGTGAGGGCTTATATTTTTGCTCTCTTCAACGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGAAACTTTGGATTGTTCAAACCAGATGGCAGCATTGCATATGATATTGGCTTCACTGGACTCACTTCTTCTGCAACCTCCACCTTTCTTTCCTTCAAGGGTATTGGATCTTTATGTTTCATGGTTTCTACTAGTTGTGCAGCTTTTCTTCTTCTTGTTGCATTGTAA 1167 0.425 MFSYSTSFFLSLLFFSVTLSHVVGDKIFTGTYGVNYGRIADNLPSPESVVTLLKASKIRNIRIYDADHQVLSAFKGSGIGIIIGLPNEFLRDISQGEDRAMNWIKENVQQFLPGTRIRGIAVGNEILGGGDMGLWQVLLPAAKNVYTALSRLNLAHQIQVSSPHSEAVFANSYPPSACTFRDDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNAGIYDAKTKLHYDNMFMAQIDAAYAALEKVGFEKMEVIVSETGWASRGDDNEAGATVKNAKTYNKNLKKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLTSSATSTFLSFKGIGSLCFMVSTSCAAFLLLVAL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1616 388 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 8 371 - -
Pvu10g1616 388 Gene3D Glycosidases 31 356 - -
Pvu10g1616 388 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Pvu10g1616 388 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
Pvu10g1616 388 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 371 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1616 Pvu-Chr10 42453400 42455056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1616 28 362 Glycoside Hydrolase AT3G15800 76.190 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1616 - - gmx:100789056 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1616 10 42453400 42455056 Pvu10g1616 10 42453400 42455056 ECH
Pvu5g1840 5 40059652 40062051 Pvu10g1616 10 42453400 42455056 PCT