Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu5g1820 | ATGGAAGCCATAACAGAGGGAGTGAACAACATCAACATCACCGATTCCTACAAGAAGAATCGCATTCAGGTCTCCAACACCAAGAAGCCCCTCTTCTTCTACGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTCGAACTTTCAGCACTAGGAATGGCTATTGCCACAGTGGTAACTGTTGCTGAAATTTTGAAAAACAACGGACTTGCTGTTGAGAAGAAAATCACGACATCAACTGTTGATATAAAGGACGATTCTAGAGGTAGACCTGTTCAAAAGGCCAAGATTGAAATAGTACTTGGGAAGACAGCAAACTTCGACGAATTGATGGCTGCTGCAGCTGCTGAAGACGGTGAAAATGGGGACGAGCAAAACGCATAA | 390 | 0.4385 | MEAITEGVNNINITDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDGENGDEQNA* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu5g1820 | 129 | PANTHER | - | 1 | 126 | - | - | |
| Pvu5g1820 | 129 | Pfam | Alba | 20 | 82 | IPR002775 | GO:0003676 | |
| Pvu5g1820 | 129 | SUPERFAMILY | AlbA-like | 19 | 114 | IPR036882 | GO:0003676 | |
| Pvu5g1820 | 129 | Gene3D | - | 18 | 129 | IPR036882 | GO:0003676 | |
| Pvu5g1820 | 129 | PANTHER | DNA/RNA-BINDING PROTEIN ALBA 3 | 1 | 126 | IPR014560 | - | |
| Pvu5g1820 | 129 | PIRSF | UCP030333_Alba | 1 | 129 | IPR014560 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu5g1820 | Pvu-Chr5 | 39920486 | 39923080 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu5g1820 | - | - | lang:109351177 | 233.032 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g1820 | 5 | 39920486 | 39923080 | Pvu5g1820 | 5 | 39920486 | 39923080 | ECH | |
| Pvu5g1820 | 5 | 39920486 | 39923080 | Pvu10g1603 | 10 | 42366772 | 42369021 | PCT |