Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1603 ATGGAAGCAATCACGGAGGGAGTGAACAACATCAACATCACTGAAGCCTACAAGAAGAATCGCATTCAGGTCTCCAATACCAAAAAGCCCCTCTTCTTTTACGTTAATCTTGCCAAGAGGTACATGCAACAGCATAATGAGGTCGAGCTCTCAGCACTGGGAATGGCTATTGCTACAGTGGTTACTGTTGCTGAAATCTTGAAAAACAATGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATTAAAGATGATTCTAGAGGAAGACCCGTCCAGAAGGCCAAGATTGAAATATTACTGGGGAAGACTGCAAATTTTGATGAGTTGATGGCTGCTGCGGCTGCTGAAGATGGTGAAAATGGAGAAGCTGAAGAGCACACTGCTTAA 396 0.4318 MEAITEGVNNINITEAYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAEDGENGEAEEHTA* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1603 131 PANTHER - 1 127 - -
Pvu10g1603 131 Gene3D - 18 129 IPR036882 GO:0003676
Pvu10g1603 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Pvu10g1603 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Pvu10g1603 131 Pfam Alba 20 75 IPR002775 GO:0003676
Pvu10g1603 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 127 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1603 Pvu-Chr10 42366772 42369021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1603 - - lang:109351177 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1603 10 42366772 42369021 Pvu10g1603 10 42366772 42369021 ECH
Pvu5g1820 5 39920486 39923080 Pvu10g1603 10 42366772 42369021 PCT