Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1819 GTGCACTTCCTCTCTTTTTTTTCTTCTGCTCCTTCCCTTTCTATCTTCTTCTTCTCTCTCTCTGGTTTTGCATTTTCAACTCTTGGTTTGTTGCTTCAGAAAATGAAAGAAATCGTAGAAAACCCTCTGCACCTAAAGTCCGTCAACCACATCTCCCTCGTCTGCACCTCCGTCGTAAAATCCATCAACTTCTATCAGAACGTTCTCGGCTTCTTCCCCATCAGAAGGCCAGGATCATTTGATTTTGACGGCGCATGGCTATTTGGATATGGAATTGGGATTCACTTGCTTCAATTAGAGGAGCCGAACGTGATTCCAAGAAAGAAAGAAATCAATCCAAAGGATAATCACATATCATTCCAGTGTGAAAGCATGGTGGCAGTGGAGAAGAAGCTTGAGGAAATGGAGATGGAGTACGTGCGTGCAACGGTGGAAGAAGGTGGGATCAAAGTGGACCAGTTGTTTTTCCATGACCCAGATGGGTTCATGATCGAGATATGCAACTGTGATAGCCTTCCGGTGATTCCTTTGGGAGGTGACATGGTTAGGTCATGCTCTCGAGTGAACCTTCAGATGCTTCAACACAGACAGATACACCAGATTGTGAAACAGGACTCAACCAAAATTCAAAATGCTATTGTTTAA 645 0.4388 VHFLSFFSSAPSLSIFFFSLSGFAFSTLGLLLQKMKEIVENPLHLKSVNHISLVCTSVVKSINFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLQLEEPNVIPRKKEINPKDNHISFQCESMVAVEKKLEEMEMEYVRATVEEGGIKVDQLFFHDPDGFMIEICNCDSLPVIPLGGDMVRSCSRVNLQMLQHRQIHQIVKQDSTKIQNAIV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1819 214 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 47 169 IPR037523 -
Pvu5g1819 214 PANTHER - 35 202 - -
Pvu5g1819 214 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 48 166 IPR004360 -
Pvu5g1819 214 PANTHER BNAC05G11680D PROTEIN 35 202 - -
Pvu5g1819 214 Gene3D - 40 171 IPR029068 -
Pvu5g1819 214 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 36 168 IPR029068 -
Pvu5g1819 214 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1819 Pvu-Chr5 39915973 39917137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1819 - - zju:107408212 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1819 5 39915973 39917137 Pvu5g1819 5 39915973 39917137 ECH
Pvu5g1819 5 39915973 39917137 Pvu10g1602 10 42356603 42363105 PCT