Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1602 ATGGTTAAATTTTCATCGAAAACAAAAGACATGGATCTACCATTAGGAGAAAAAAAGGGAATTTTGGATTCACATTGTACTGACAGGAATCAAACGACAGGTGTTAATACCGACATGATCAAAGTCATTAGGATCGAACAGAAGATCTTTTGTTTGACAATGAAGGACACCAGTGTTGAAAACCCTCTGCGCCTTCAGTCTGTAAATCACATCTCCCTCATATGCAGATCAGTGGAAGAATCAATGGATTTCTACCAGAACGTTCTTGGATTTTTCCCCATTAGAAGGCCTGGTTCTTTTGATTTTGATGGGGCATGGCTATTCGGCTATGGTATTGGGATTCATCTGCTAGAAGCAGAGAACCCAGAAAAGTTGCCAAAGAAGAAGGAAATTAACCCGAAGGATAATCATATATCTTTTCAGTGTGAGAGCATGGGGGCAGTGGAGAAGAAGCTGAAGGAGATGGATATTGCTTATGTGAGAGCAACGGTGGAGGAAGGTGGGATCCAAGTGGACCAACTCTTCTTCCACGACCCTGATGGCTTCATGATCGAGATATGCAACTGTGATAGCTTACCTGTGATTCCCTTGGTTGGTGAAGTGGCAAGAACATGTTCCCTTGTGAATCTTGAGAAAATGCAGAATCAGCAGCAGCAGATACAAAACATGCTTCAACAACTGTGA 684 0.4225 MVKFSSKTKDMDLPLGEKKGILDSHCTDRNQTTGVNTDMIKVIRIEQKIFCLTMKDTSVENPLRLQSVNHISLICRSVEESMDFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMDIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARTCSLVNLEKMQNQQQQIQNMLQQL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1602 227 PANTHER BNAC05G11680D PROTEIN 59 221 - -
Pvu10g1602 227 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 67 189 IPR037523 -
Pvu10g1602 227 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 60 188 IPR029068 -
Pvu10g1602 227 Coils Coil 210 227 - -
Pvu10g1602 227 CDD VOC_like 68 186 - -
Pvu10g1602 227 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 68 186 IPR004360 -
Pvu10g1602 227 Gene3D - 53 227 IPR029068 -
Pvu10g1602 227 PANTHER - 59 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1602 Pvu-Chr10 42356603 42363105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1602 - - pvu:PHAVU_010G154400g 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1602 10 42356603 42363105 Pvu10g1602 10 42356603 42363105 ECH
Pvu5g1819 5 39915973 39917137 Pvu10g1602 10 42356603 42363105 PCT