Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1817 ATGGAAGCGGTGCAGCTGGTGGCGTTGCGGCTGCGCGTGGTTCCGGTGGCGGCGTACCTCTTACGAAACGGCGTCGTAATGCACGGGTGCCTTCGAAGCAGCAGCAGCACCACCACCACCACCACCAGCACGAACGGAATGGCAGGGAAGAGGATGAGCTCAGGTTCGGGATGGTTGATGGACGGAGCATGGAAGTTACCGAAAATTGTGAAAGCCGGAGAACCGGTTCTGCACGAGCGAGCCAAAGAAGTTGAGGCGTCAGAGATGAAATCAGAGAGAGTACAGAAGATCATCGACGACATGATCCGCGTCATGCGAAAGGCACCTGGTGTTGGTCTCGCTGCTCCACAGATTGGAATTTCCCTTAGGATAATTGTTTTGGAAGATAAAGAAGAATATATGGGTTATGATGATGAGGAAGCGCTCAAAGAACAAGATAGAAGACCTTTTCATCTTATGGTGATCTTGAATCCTAAGCTGAAGAAGAAGACCAACAGTGTTGTTGGTTACGCTGTGGTAGAGCGACACCTTGATGTTGAGGTCGAAGGTTTTGATCGTTACGGGAAACCCATCAAAATAAATGCCACTGGTTGGCAGGCTCGGATTTTACAACATGAGTGTGATCACTTGGATGGAACACTGTATGTTGATAAGATGGTACCTCGAACTTTCAGAGCTCCAGAAAACAGTTCTAAGCCTCTTGCCCGTGGATGCCCCAAACTTGGCCCTCGCTAA 735 0.498 MEAVQLVALRLRVVPVAAYLLRNGVVMHGCLRSSSSTTTTTTSTNGMAGKRMSSGSGWLMDGAWKLPKIVKAGEPVLHERAKEVEASEMKSERVQKIIDDMIRVMRKAPGVGLAAPQIGISLRIIVLEDKEEYMGYDDEEALKEQDRRPFHLMVILNPKLKKKTNSVVGYAVVERHLDVEVEGFDRYGKPIKINATGWQARILQHECDHLDGTLYVDKMVPRTFRAPENSSKPLARGCPKLGPR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1817 244 PRINTS Peptide deformylase signature 99 128 IPR023635 GO:0042586
Pvu5g1817 244 PRINTS Peptide deformylase signature 173 191 IPR023635 GO:0042586
Pvu5g1817 244 PRINTS Peptide deformylase signature 192 221 IPR023635 GO:0042586
Pvu5g1817 244 PANTHER PEPTIDE DEFORMYLASE 61 244 IPR023635 GO:0042586
Pvu5g1817 244 MobiDBLite consensus disorder prediction 32 54 - -
Pvu5g1817 244 Gene3D Peptide deformylase 65 243 IPR036821 -
Pvu5g1817 244 MobiDBLite consensus disorder prediction 32 51 - -
Pvu5g1817 244 Pfam Polypeptide deformylase 68 222 IPR023635 GO:0042586
Pvu5g1817 244 SUPERFAMILY Peptide deformylase 64 227 IPR036821 -
Pvu5g1817 244 CDD Pep_deformylase 69 215 IPR023635 GO:0042586
Pvu5g1817 244 Hamap Peptide deformylase [def]. 65 234 IPR023635 GO:0042586
Pvu5g1817 244 PANTHER PEPTIDE DEFORMYLASE 61 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1817 Pvu-Chr5 39904755 39907258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1817 K01462 - gmx:100306710 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1817 5 39904755 39907258 Pvu5g1817 5 39904755 39907258 ECH
Pvu5g1817 5 39904755 39907258 Pvu10g1600 10 42346466 42349550 PCT