Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1804 ATGGTGGTAAAAGTAGATAGTGGACAGAAGGAAGATTTCCAAATTAATTATCATATCCCGGGTACAAGAAAGAAGAGGCAAATACCAATAAACTTCAGTTCCTTTTACAAGTGCAGTTCTTGTTGTAGTAGCTGGGGTGCTTCTGCTTCACCAATTACTTCAAACAGTAAAATGAGTCATGCAATGGGCTCTGGCAGTAGAACCACTCTAAGAACTTTTGAGTTTGGAAAGACATATGTAGTGAGACCCAAAGGAAAACACCAAGCCACTATAATTTGGTTGCATGGTCTTGGTGACAATGGTTTGAGCTCATCTCAGCTTTTGGAATCCCTTCCACTCCCAAATATAAAATGGATTTGTCCAACTGCCCCCACCCGTCCTGTGGCCATACTTGGTGGTTTTCCATGCACAGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGCCCAGATGATTGGGAGGGTTTGGATGCCTCAGCAACTCACATTGCTAACTTGTTGTCAACAGAGCCTGCTGATGTGAAAGTTGCTATTGGAGGCTTCAGCATGGGTGCAGCAATAGCCCTATACTCTGCAACTTGTTTTGCCATAGGAAGGTATGGAAATGACATTCCCTACCCTGTCAATCTAAGAACAGTGGTTGGACTCAGTGGTTGGCTTCCCGGATCAAGGACCTTAAGGAACAAGATAGAAGTATCACATGAAGCAACACGAAGAGCAACTTCATTGCCCATTTTGCTGTGCCATGGAATCAGTGATGATGTAATCCTTTACAAATATGGTGAAAAATCAGCTCAATCTTTATGCTCTGCAGGGTTTCGATATGTTGCATTCAAATCCTATGAAGGGCTTGGTCATTACACAATTCCCAGAGAGATGGATGAGGTTTGCACTTGGCTTAGTTCAAGGTTGGGCCTTGAAGGCTCCTCATAA 933 0.4341 MVVKVDSGQKEDFQINYHIPGTRKKRQIPINFSSFYKCSSCCSSWGASASPITSNSKMSHAMGSGSRTTLRTFEFGKTYVVRPKGKHQATIIWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASATHIANLLSTEPADVKVAIGGFSMGAAIALYSATCFAIGRYGNDIPYPVNLRTVVGLSGWLPGSRTLRNKIEVSHEATRRATSLPILLCHGISDDVILYKYGEKSAQSLCSAGFRYVAFKSYEGLGHYTIPREMDEVCTWLSSRLGLEGSS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1804 310 Gene3D alpha/beta hydrolase 69 305 IPR029058 -
Pvu5g1804 310 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 39 310 - -
Pvu5g1804 310 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 39 310 - -
Pvu5g1804 310 Pfam Phospholipase/Carboxylesterase 79 301 IPR003140 GO:0016787
Pvu5g1804 310 SUPERFAMILY alpha/beta-Hydrolases 79 304 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1804 Pvu-Chr5 39829447 39834753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1804 58 309 Acyl Lipid Metabolism Gene Families AT3G15650 75.397 3.09e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1804 K06130 - gmx:100798395 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1592 10 42305066 42308995 Pvu5g1804 5 39829447 39834753 ECH
Pvu9g2051 9 29375738 29384920 Pvu5g1804 5 39829447 39834753 ECH
Pvu5g1804 5 39829447 39834753 Pvu5g1804 5 39829447 39834753 ECH
Pvu5g1804 5 39829447 39834753 Pvu10g1592 10 42305066 42308995 PCT