Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1592 ATGAGCTATGCACATTATCATATGGGCTCTGGTAGTAGAACTGCTCGGAGAAGTTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGCTCATATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGCCCTGTAACAATACTTGGTGGTTTTTCCTGCACTGCATGGTTCGACATGGGAGAACTTTCAGAAGATGGTCCAGATGATTCAGAGGGTTTAGATGCCTCAGCAGCACACATTGCCAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCATATCCAGTGAACTTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAATGAGCTTAAGGAACAAAATTGAAGTGTCACATGAAGCTAGAAGGAGAGCTGCTTCATTACCTGTTCTTCTGAGCCATGGAAGCAGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTGAGTTCAGCAGGGTTTCGATACATTACATTCAAGTCATATGATGGGCTTGGTCATTATACTGTTCCTAGGGAGATGGATGAGGTCTCCAATTGGCTTAACTCAAGGCTGGGGCTTGGGGGATCCTCATGA 771 0.4565 MSYAHYHMGSGSRTARRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDSEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSMSLRNKIEVSHEARRRAASLPVLLSHGSSDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1592 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Pvu10g1592 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Pvu10g1592 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Pvu10g1592 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Pvu10g1592 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1592 Pvu-Chr10 42305066 42308995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1592 1 255 Acyl Lipid Metabolism Gene Families AT3G15650 72.830 1.76e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1592 K06130 - gmx:100782153 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1592 10 42305066 42308995 Pvu5g1804 5 39829447 39834753 ECH
Pvu9g2051 9 29375738 29384920 Pvu10g1592 10 42305066 42308995 ECH
Pvu10g1592 10 42305066 42308995 Pvu10g1592 10 42305066 42308995 ECH
Pvu5g1804 5 39829447 39834753 Pvu10g1592 10 42305066 42308995 PCT