LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu5g1803	ATGTTCCGGAGAATCCTCTCTTCTTCCAACCTCAAATCCCTGCACACGGCGCTCTCTTCTCCCCGTCTCCGATTCGCCGCCCCTCCCCTCACCCGCCACCTCACCGCTCAATCAGGCGCTTCTTCCGTCAGAAAGCGCGTCGAAGATGTCGTGCCAATTGCCACCGGCCACGAGCGAGAGGAGATTCAGGCCGATCTCGAGGGGAGGGATATTCTTAAAATCAACCATCCTGAAGGTCCTTTCGGCACAAAGGAAGCACCTGCTATTGTTAAATCTTACTATGACAGAAGGATAGTTGGATGCCCAGGAGATGAAGGTGAAGATGAGCATGATGTGGTATGGTTTTGGCTGGAGAAAGGCAAGCCTTATGAATGTCCAGTGTGCACACAGTATTTTGAGCTCCAAGTGGTCGGACCTGGTGGTGATCCTTATGGACATGGCGATCATCATTGA	453	0.5232	MFRRILSSSNLKSLHTALSSPRLRFAAPPLTRHLTAQSGASSVRKRVEDVVPIATGHEREEIQADLEGRDILKINHPEGPFGTKEAPAIVKSYYDRRIVGCPGDEGEDEHDVVWFWLEKGKPYECPVCTQYFELQVVGPGGDPYGHGDHH*	151

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu5g1803	150	Pfam	Cytochrome c oxidase subunit Vb	54	142	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu5g1803	150	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	41	141	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu5g1803	150	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	149	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu5g1803	150	Gene3D	Cytochrome c oxidase, subunit Vb	44	137	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Pvu5g1803	150	CDD	Cyt_c_Oxidase_Vb	45	139	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu5g1803	150	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	149	-	-
	Pvu5g1803	150	SUPERFAMILY	Rubredoxin-like	44	140	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu5g1803	Pvu-Chr5	39821619	39824614	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu5g1803	K02265		-	gmx:100801050	247.284

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu10g1591	10	42289697	42296155	Pvu5g1803	5	39821619	39824614	ECH
	Pvu5g1803	5	39821619	39824614	Pvu5g1803	5	39821619	39824614	ECH
	Pvu5g1803	5	39821619	39824614	Pvu10g1591	10	42289697	42296155	PCT