LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu10g1591	ATGTTGCGGAGGTTTCTCTATTCTCACCTCAAAACCCTAGCCGCCGCTTCTTCCTCTTCTTTAACTTCCCGATCTGCTTCCGCCGCCGCCAGATTCCCCGCTCTTTCTCGCTCCTCCCGCTACTTCTCAACTCAATCCGAGGATGTTACTGCGATCAAAAAGAAGGTTGAGGATGTAATGCCTATCGCTACCGGACACGAGCGCGAGGAGCTTCAAGCTGAGCTCGAGGGAAGGAATATTCTTGAAATAGACCATCCCGAAGGTCCATTCGGCACAAAGGAAGCACCTGCCATTGTAAAATCTTACTATGATAAAAGGATAGTTGGATGCCCAGGCGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCACATGAATGCCCTGTGTGCGCACAGTATTTTGCTCTTGAAGTAGTAGGACCTGGTGGACCACCTGATGGACATGGCGATGATGATCACCACCATTGA	489	0.5051	MLRRFLYSHLKTLAAASSSSLTSRSASAAARFPALSRSSRYFSTQSEDVTAIKKKVEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAIVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFALEVVGPGGPPDGHGDDDHHH*	163

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu10g1591	162	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	17	162	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu10g1591	162	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	51	150	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu10g1591	162	Gene3D	Cytochrome c oxidase, subunit Vb	52	146	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Pvu10g1591	162	PANTHER	-	17	162	-	-
	Pvu10g1591	162	CDD	Cyt_c_Oxidase_Vb	51	146	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu10g1591	162	Pfam	Cytochrome c oxidase subunit Vb	62	149	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Pvu10g1591	162	SUPERFAMILY	Rubredoxin-like	52	149	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu10g1591	Pvu-Chr10	42289697	42296155	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu10g1591	K02265		-	gmx:100780886	247.669

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu10g1591	10	42289697	42296155	Pvu5g1803	5	39821619	39824614	ECH
	Pvu10g1591	10	42289697	42296155	Pvu10g1591	10	42289697	42296155	ECH
	Pvu5g1803	5	39821619	39824614	Pvu10g1591	10	42289697	42296155	PCT