Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1790 ATGCCTTCACTCTCAGAAGTCTACAGAGCCCACCCCGTTCACGTTCAACACAAGCACCCTGATTTGAACTCTCTGCAAGAACTCCCTGAATCTTACACTTGGACTCAAATGGAAGACCAAGCTAATAATCACCCTTCTAATTGTGGCCTCAACGAGGGTGTTCCCGTCATTGATCTCAATGACCCAAATGCTCCAAAGCTAATAGGTCATGCATGCATAAGTTGGGGAGTGTACCAAGTGGTCAACCATGGCATACCCTTCACTCTTCTCGATGAGATTCAGTGTCTTGGAGAGACCCTCTTCTCTCTTCCCTCTCACCACAAGCACAGAGCTGCTCGTTCCCCTGATGGTGTTGATGGCTATGGCCTCGCTCGCATCTCTTCCTTCTTCCCCAAACTCATGTGGTCCGAAGGCTTCACCATTGTTGGATCTCCTCTCGAGCGTTTTCGCCAACTGTGGCCCCAAGATTATAACAAATACTGTGACACTGTCATGCAATACGATGAAACGATGAAAAAGCTTGCGGAAAAGCTGATGTGGCTGATGTTGGAATCTCTGGGCATTACAAAGGAAGACCTAAAATGGGCTGGTGCAAAAGGTCAATTCAAGAACACATGCGCTGCATTGCAGTTGAATTCGTACCCGACTTGTCCGGATCCGGATCGGGCCATGGGTCTCGCCGCCCACACCGACTCCACCCTTCTCACAATTCTCTACCAAAACAACATAAGCGGGTTGCAGGTTCACCGGAAAGGCACCGGGTGGGTGACGGTGCCACCGGTCCCCGGCGGGCTTGTGATAAACGTGGGCGACCTCCTCCACATTTTGTCAAACGGGTTGTACCCGAGTGTGCTCCACCGGGTCCTGGTGAACCGGGTCCAGCAAAGGCTTTCGGTTGCTTATTTATGTGGGCCCCCACCCAATGTATCGATTTGTCCACATGAGAAGTTAGTGGGCCCAAATCAGCCTCGTCTTTATAAGTCAGTGACGTGGAATGAGTACCTCGGAACCAAAGCAAAGCATTTCAACAAGGCACTCTCCACTGTTCTTGTTTCTTCAGCCATTAGTGAGTTCTTAGAAGCAAAAGAAACTCAGTGA 1098 0.5009 MPSLSEVYRAHPVHVQHKHPDLNSLQELPESYTWTQMEDQANNHPSNCGLNEGVPVIDLNDPNAPKLIGHACISWGVYQVVNHGIPFTLLDEIQCLGETLFSLPSHHKHRAARSPDGVDGYGLARISSFFPKLMWSEGFTIVGSPLERFRQLWPQDYNKYCDTVMQYDETMKKLAEKLMWLMLESLGITKEDLKWAGAKGQFKNTCAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNNISGLQVHRKGTGWVTVPPVPGGLVINVGDLLHILSNGLYPSVLHRVLVNRVQQRLSVAYLCGPPPNVSICPHEKLVGPNQPRLYKSVTWNEYLGTKAKHFNKALSTVLVSSAISEFLEAKETQ* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1790 365 Pfam 2OG-Fe(II) oxygenase superfamily 209 305 IPR044861 -
Pvu5g1790 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 305 IPR005123 -
Pvu5g1790 365 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 348 - -
Pvu5g1790 365 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 348 - -
Pvu5g1790 365 SUPERFAMILY Clavaminate synthase-like 16 342 - -
Pvu5g1790 365 Gene3D - 18 345 IPR027443 -
Pvu5g1790 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 154 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1790 Pvu-Chr5 39675367 39677505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1790 54 346 Glycosyltransferase AT5G59530 30.284 1.71e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1790 K04124 - gmx:100798572 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1790 5 39675367 39677505 Pvu5g1790 5 39675367 39677505 ECH
Pvu5g1790 5 39675367 39677505 Pvu10g1580 10 42196320 42198613 PCT