Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1777 ATGGAAGAAAGCATCAATAGAGGGGAATTTCAGCCTAATTTGGCTAAACAGACTTCATTGAGGTTAGGTGGTAGTTTTAAATCAACGTTATCTGGAAGATCAACTCCGCGAAATTCGCCTTCATTTCGGCGACAGAATTCTGGCCGCACACCAAGAAAAGAAGGAAGGAGCGGTATAGGCGGGGCACTGTGGTTTCGGAGCAATCGTTTACTTTTTTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGGTTTTTCGTTCAGTCCAGGTGGGCTCATAGTGATAAGAAGGAGGAATTTTCTGGGTTTGGAACTGGGCCGCGGAATACTGGCTCAGACGCGGAACAGGTTCAGCGCCGTGATTTACTTGCTAGTGATCATTCATTGTCTGCTAATAACGAGACTGATGCAAACATAGCATTGTCTAGTAAAACTATAAATGTAGTTTTGGCCAAGAGAGGCAATGATGTTCCATCTCATCGTAAAACGAGCTCAAAGAAGAGGAGCAGGAGAAGACGTGCTTCGAAAGGTAAATCAAGTGGTAAGCTGAAACCAAGTACAGATGTTAAGGACGCTGATATAGAGGAGCAGAAGCCAGAAATTCCTACGGCCAATGGTACGTATGGATTGCTTGTGGGTCCGTTTGGCCCAGTGGAGGATAGGATTCTGGAATGGAGTCCAGAGAAACGTTCTGGGACATGTAACAGGAAGGGGGACTTTGCACGTCTTGTTTGGTCCAGAAGATTTATCTTGGTATTCCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACCGAACTTTTGAGCTGTGGGGCTACGGTTTCAGCTGTTGTGCTTAGCAAGAAAGGTGGCTTGATGTCAGAGCTTGCTAGGAGACGGATCAAGGTGCTTGAGGACAAAGCTGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTCATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGATCAATATATCGAACGTTTTCCTGCTGGTGCAAGCCAAGTTGTCTGGTGGATTATGGAAAATCGGCGAGAGTACTTTGATCTTTCAAAAGATGCATTGGACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGTTAAAATGGTGCGAAGAGGAAAGCATAAAACTTAGATCCTACCCTGAAATTATTCCATTGTCTGTTAATGATGAACTGGCATTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTTAGTACTGACAAAATGGTGGAGAAAAGGCAGTTATTGCGGGAATCAGTCCGAAAAGAAATTGGCCTAAATGATAGTGACATGCTTGTGATATCTCTGAGTAGCATCAACCCTGGGAAGGGCCAGCTCTTGCTTCTTGAATCAGTAAGCTCAGTACTTGAACAAGGATGGTTGCAAGATGATAAGAAAATGAAAAAGGTATCAAATATAAAGGAAGGCATATCTACCCTGGCTAGAAAGCATCGTATTAGAAAATTGTTGCCGGTGTTGAAGAATGGCAAAGTAGTTTCAAATGATATCTCAAGCAATTCTTTAAGCAGGAGGAAACAAGTTTTGCCTGATGACAAAGGAACAATTCAAAAATCTCTCAAGCTTCTTATTGGTTCTGTTGGATCAAAGAGTAACAAGGCAGATTATGTTAAAAGCCTTCTAAATTTCTTAGAACAGCATCCAAACACCTCAAAATCAATTTTTTGGACTCCAGCCACAACTCGGGTTGCCTCACTTTACTCTGCTGCCGATGTTTATGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCGTTTGGTCTTCCGGTTCTTGGAACGGAAGCTGGGGGAACAAAGGAGATTGTTGAGCACAATGTTACAGGTCTTCTTCATCCTGTTGGACATCCAGGGAATCTTGTTCTGGCTCAGAATCTCCGGTTTTTGCTCAAAAACCAGTTGGCAAGGAAGCAAATGGGTGTGGAAGGAAGAAAGAAGGTACAGCAAATGTATTTGAAGCAACACATGTATAAGAAATTTGTAGAGGTTATTGTGAGATGCATGAGAAGTAAATAA 2106 0.4278 MEESINRGEFQPNLAKQTSLRLGGSFKSTLSGRSTPRNSPSFRRQNSGRTPRKEGRSGIGGALWFRSNRLLFWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTGSDAEQVQRRDLLASDHSLSANNETDANIALSSKTINVVLAKRGNDVPSHRKTSSKKRSRRRRASKGKSSGKLKPSTDVKDADIEEQKPEIPTANGTYGLLVGPFGPVEDRILEWSPEKRSGTCNRKGDFARLVWSRRFILVFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMSELARRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIDQYIERFPAGASQVVWWIMENRREYFDLSKDALDRVKMLVFLSESQSKQWLKWCEEESIKLRSYPEIIPLSVNDELAFVAGIPSTLNTPSFSTDKMVEKRQLLRESVRKEIGLNDSDMLVISLSSINPGKGQLLLLESVSSVLEQGWLQDDKKMKKVSNIKEGISTLARKHRIRKLLPVLKNGKVVSNDISSNSLSRRKQVLPDDKGTIQKSLKLLIGSVGSKSNKADYVKSLLNFLEQHPNTSKSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTEAGGTKEIVEHNVTGLLHPVGHPGNLVLAQNLRFLLKNQLARKQMGVEGRKKVQQMYLKQHMYKKFVEVIVRCMRSK* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1777 701 MobiDBLite consensus disorder prediction 152 196 - -
Pvu5g1777 701 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
Pvu5g1777 701 MobiDBLite consensus disorder prediction 24 46 - -
Pvu5g1777 701 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 253 694 - -
Pvu5g1777 701 CDD GT4_PimA-like 250 694 - -
Pvu5g1777 701 MobiDBLite consensus disorder prediction 24 58 - -
Pvu5g1777 701 PANTHER BNAA05G14870D PROTEIN 1 701 - -
Pvu5g1777 701 MobiDBLite consensus disorder prediction 163 179 - -
Pvu5g1777 701 Pfam Glycosyl transferases group 1 558 675 IPR001296 GO:0016757
Pvu5g1777 701 Gene3D Glycogen Phosphorylase B; 421 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1777 Pvu-Chr5 39559766 39564127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1777 24 699 Glycosyltransferase AT3G15940 61.460 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1777 - - gmx:100793827 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1777 5 39559766 39564127 Pvu5g1777 5 39559766 39564127 ECH
Pvu5g1777 5 39559766 39564127 Pvu10g1572 10 42102282 42106170 PCT