Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1572 ATGGAGGATTGCAACAACAAAGGAGAAGTTCATGCAAATTTTACAAAGCAGAAGAACTCTTCAGCAAGATCAGGTATCAGTTTGAAATCTACTTCTTCTGGAAGGTCAAGTCCACATTCTACCTTAACACCAAGAAGAGAAGTCAAGCGTGTTGCACAGTGCTATGGGAGCAACAGGTTACTGTTATGGCTGCTTTTGATAACCCTTTGGGCTTATCTTGGATTTTGTGTTCAGTCTAGGTGGGCACATGATGATAAGGAGGGGGAATTTTCAGGGTTGAAAAGCAGGCCAAGTGATGCAACAAACTCATATGTTGAACAGAATCAGCATCATGATTTGATTGCCAGAAACATTTCCTTATCTGTTAACATTGAACAAGTTGGAAACAGAACAATGGATGTTGTGGCTTTGGCCAAGAAAGAATATGGTGTTCTGTCTCCAGTTAAAGCAAGCTCAAGGAAAAGGAGAAGGCGACCAGTCCAAGGTAAGAGGAGGCGAAAACATAAACTTGAGAGCAGTCATTTAGAGGAGCTGGAGGCAGAGATTCCCCCAAGGAATTCTACCTATGGATTCCTTGTTGGTCCATTTGGATCATTAGAGGATAGAATTCTGCAATGGAGTCCTCAGAGGCCTTATGAAAGCTGTGACACGAGAGGGGACTTTGCACACCTTGTTTGGTCAAGAAAGTTTGTTTTGATCTTTCATGAACTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGAGGCTTCTGTTTATGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTCGCTAGGAGGCATATCAAGGTGCTTGATGACAAAGCATATCTCAGCTTCAAAACTGCAGCCAAAGCAGATCTTGTCATTGCTGGATCAGCGGTCTGTGCATCATGGATTGAACAATACATTGAACGTTTTCCCGCTGGAGCAAGTAAAGTTGCCTGGTGGATTATGGAAAACAGACGAGAGTACTTTGATCGTGCAAAGGATGTGTTGCACAGAGTGAAAACACTGATTTTTCTCTCTGAAGCACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAAAGCATAAAATTGAGATTACAGCCAGCACTTGTTCCATTGTCTGTCAATGATGAACTAGCTTTTGTAGCAGGCATTCCCTCTACACTCAATGCTCCATCCTTCAGTGCTGGAAAAATGGATGAGCAGAGGAAGTTGTTGAGAGATTCAGTTAGAAGAGAAATGGGGTTGAGTGATAATGATATGCTTGCGATCACTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTATTTCTTCTTGAATCAGCAAGATCAATTGTAGAAGACAAACCATTGCACCATGATACTAAGAAAACAGCAGTGTCATCAGATGATGGAGAATACCTATCTACCACCTTGTCTAGAAGACATCATGTTAGAAAATTGTTCAAGAATAGTAGTGTAGCCTTCAACAATATCTCAAGTACATTTATAAACAGCAAGGAAGTGTTCTCCCACAACAATGGAACACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGCAACAAAGTGGATTATGTTAAAGGTCTTCTAAGATTTTTATCACAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACCTCAGCCACTACACGTGTTGCCTCACTTTATTCTGCTGCAGATGTTTATGTCACAAACTCTCAGGGATTGGGAGAAACATTTGGAAGAGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGAGGAACACAAGAAATTGTTGAACATAATGTGACAGGTCTCCTTCATCCTATTGGACGCACAGGGAATCGTGTCCTTGCACAGCATCTCCGATTTTTACTTGAAAACAGCTTTGCAAGAGAGAAAATGGGGATGGAAGGAAGAAAAAAGGTGCAGAGGATGTTCTTGAAGCAGAACATGTATGAGAAATTTGTTGATGTTCTTGTCATGTGCATGAGAAGAACCAAATAA 2040 0.4172 MEDCNNKGEVHANFTKQKNSSARSGISLKSTSSGRSSPHSTLTPRREVKRVAQCYGSNRLLLWLLLITLWAYLGFCVQSRWAHDDKEGEFSGLKSRPSDATNSYVEQNQHHDLIARNISLSVNIEQVGNRTMDVVALAKKEYGVLSPVKASSRKRRRRPVQGKRRRKHKLESSHLEELEAEIPPRNSTYGFLVGPFGSLEDRILQWSPQRPYESCDTRGDFAHLVWSRKFVLIFHELSMTGAPLSMMELATELLSCEASVYAVVLSRKGGLMQELARRHIKVLDDKAYLSFKTAAKADLVIAGSAVCASWIEQYIERFPAGASKVAWWIMENRREYFDRAKDVLHRVKTLIFLSEAQSKQWQKWCEEESIKLRLQPALVPLSVNDELAFVAGIPSTLNAPSFSAGKMDEQRKLLRDSVRREMGLSDNDMLAITLSSINRGKGQLFLLESARSIVEDKPLHHDTKKTAVSSDDGEYLSTTLSRRHHVRKLFKNSSVAFNNISSTFINSKEVFSHNNGTQSLKILIGSVGSKSNKVDYVKGLLRFLSQHSNLSKSVLWTSATTRVASLYSAADVYVTNSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRTGNRVLAQHLRFLLENSFAREKMGMEGRKKVQRMFLKQNMYEKFVDVLVMCMRRTK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1572 679 MobiDBLite consensus disorder prediction 10 41 - -
Pvu10g1572 679 Pfam Glycosyl transferases group 1 541 652 IPR001296 GO:0016757
Pvu10g1572 679 MobiDBLite consensus disorder prediction 148 175 - -
Pvu10g1572 679 CDD GT4_PimA-like 229 671 - -
Pvu10g1572 679 MobiDBLite consensus disorder prediction 150 169 - -
Pvu10g1572 679 MobiDBLite consensus disorder prediction 1 44 - -
Pvu10g1572 679 Pfam Glycosyl-transferase family 4 226 395 IPR041693 -
Pvu10g1572 679 Gene3D Glycogen Phosphorylase B; 404 658 - -
Pvu10g1572 679 PANTHER BNAA05G14870D PROTEIN 1 677 - -
Pvu10g1572 679 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 234 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1572 Pvu-Chr10 42102282 42106170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1572 27 676 Glycosyltransferase AT3G15940 58.285 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1572 - - gmx:100796443 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1572 10 42102282 42106170 Pvu10g1572 10 42102282 42106170 ECH
Pvu5g1777 5 39559766 39564127 Pvu10g1572 10 42102282 42106170 PCT