Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1776 ATGGCTACGGCGGGTGAAGAAGGGCTTGAGTACGAGAGTGATCCCGAAGAGGCCACGAGATCGCTCGCAATGCGGAGAAGGCGCGAGGCCAGTGATGATGAGGAAGGCGACGCCGACGAGAGGAACGTCGCCGTCGATCGCCGGATAGACTATTCCGATGATTCCGACGGCGAGGGTGGCGTGGCGGATTATGACGACGAAGAAGAATTGGAAGAAGAGGAAGAAGAGCAGGAGGAAGAGGAGTTGTTGGAAGAAGAAGAGAATGAGGGTAGGGTTGCAGAGGAAGGAGGTGTGAATGGTACAGTGGTTAAGGACTCTGATGCTGATGTTAAAGAGCCTTTGGAGGAATCAGGGAATGGAGACGAGGAAGAGAAGAAGGAGAATGAACCGTTTGCGGTGCCCACTGCTGGAGCATTTTATATGCACGATGATCGCTTCAGGGATAATTCCGGTGGACGCCAGAGGCGCATGCGTGGTGGAAGGAGACTCTGGGAGTCCAAGGATGACAGGAAGTGGGGACATGATAAGTTTGAGGAAATTACTCTGCAAGAAAGGCACTACAAAGAGGGAAGGAGACCTTCAAAGGGTAGTTATAGAGGTCGTGGAGGTAAAACACGAGGTGTTGATCGCAGTGGAGGATATGTTCGAGGTAACAGAAAAGGGTATGATGATAACAGGGGCAATCAAACACAGGCACCAAAGAGTGTTGTCCGAGGGAGAGGACCCCGTAGGTACGAGCCTACTAATAAGAGCAATGATTTAGCATCACAGGCGCAAAATAAAGAATATGGGAAGCAGCCAGAGAAAGTTTCACATGGTGGTACAGGGAAAACTTTCACTCCAGTCTCAAATTCTGAGCCCGATCCTGTACCTTCCAAGAAACAGGTCTTTGCATCAAATTTGAATTATGCATCTCCCCCTTTTTACCCTTCAAGTTCTTCTAACAAAGATACAAGTGTGACATCAAAAGGGGATATCCAAACTGCTGCTGCAAGCAGGAACATTCGGCCTGGTGTTGTCGATGAGGGTTTTTTTGTTCAACAAAACAATGCACTTCTTCGGGGAAAGAATGTTGTTGATCATGTCAGCATGGAGAAGTTGTATATTGATCGGTCTGGCGCTCCATCTGTTGGGAAAGCTTTTAACAATTTGCATATGCCGCCACCTGGATCTTCTGGAGTTAATGCATCTCAGTCTACTCATTCAAGAGGTACTGGGAGGGGTGGAGCAGTACCAGTGCAGATGAATTATCAGCGTGCTGCCTCTCATAATCAAGCTAGTAAAATTGATCCAACTCAACTCCAGGCTATTCAGAGAACTGCTCCAGGGCGAACTTCACCTTCTGTGCAAGCCCCTGCTCCACAGTTGGGTCATCGACCTGGTAGTGGGTCTCAAGCTTCATCTCCCCCAATCACGTCCGCTGCAATTAGTTCATTGGATTCTGGAGAAATTGATGGAGCTTCAGAATCAGGTAAATTGAAGGGTGCATTGGTTGGGAAGGGAAGGGAAGCTTCCCAGGGTAGCGGAAGGGGCTCTTTTGTTTATGGTGGAACTATGGGCACTGCTGGAAATGTCAATGGTAATCATGGAGATCAGAACTTCCCAACCTTTTTGCCAGTTATGCAATTTGGTGGGCAGCATCCTGGTGGCATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGGTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACATGGCTACCAGTTTTGACTGGGGCAGCAGGAGCTCTAGGGGCGGCTGGAGCTTTAGGGGCAGCAGGTGCTTTAGGGGCTACATACTGTCCACCCTATCTCACTGTTGATGGTGCTTATCATCCACGACAACCAGGGCAGACATCTGCAACAGCTACTTCAAGCAAGGAAAATATTGTGAATAAAGGTAGTAATGAATGGAAGGCACCCCCAAAATCTGAGACTGTAAATGATGAGTTTGGACAGCGGCATAATAAGCCCCGCAGATACTCGGAGATGAACTTTGGGCAATGA 2022 0.4871 MATAGEEGLEYESDPEEATRSLAMRRRREASDDEEGDADERNVAVDRRIDYSDDSDGEGGVADYDDEEELEEEEEEQEEEELLEEEENEGRVAEEGGVNGTVVKDSDADVKEPLEESGNGDEEEKKENEPFAVPTAGAFYMHDDRFRDNSGGRQRRMRGGRRLWESKDDRKWGHDKFEEITLQERHYKEGRRPSKGSYRGRGGKTRGVDRSGGYVRGNRKGYDDNRGNQTQAPKSVVRGRGPRRYEPTNKSNDLASQAQNKEYGKQPEKVSHGGTGKTFTPVSNSEPDPVPSKKQVFASNLNYASPPFYPSSSSNKDTSVTSKGDIQTAAASRNIRPGVVDEGFFVQQNNALLRGKNVVDHVSMEKLYIDRSGAPSVGKAFNNLHMPPPGSSGVNASQSTHSRGTGRGGAVPVQMNYQRAASHNQASKIDPTQLQAIQRTAPGRTSPSVQAPAPQLGHRPGSGSQASSPPITSAAISSLDSGEIDGASESGKLKGALVGKGREASQGSGRGSFVYGGTMGTAGNVNGNHGDQNFPTFLPVMQFGGQHPGGIGVPAVGMAFPGYVGQPQLGLGNSEMTWLPVLTGAAGALGAAGALGAAGALGATYCPPYLTVDGAYHPRQPGQTSATATSSKENIVNKGSNEWKAPPKSETVNDEFGQRHNKPRRYSEMNFGQ* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1776 673 SMART Btz_2 91 202 IPR018545 GO:0003729|GO:0006397|GO:0035145
Pvu5g1776 673 MobiDBLite consensus disorder prediction 618 638 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 388 405 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 1 293 - -
Pvu5g1776 673 Pfam CASC3/Barentsz eIF4AIII binding 113 203 IPR018545 GO:0003729|GO:0006397|GO:0035145
Pvu5g1776 673 MobiDBLite consensus disorder prediction 617 673 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 276 293 - -
Pvu5g1776 673 PANTHER PROTEIN MLN51 HOMOLOG 596 673 - -
Pvu5g1776 673 PANTHER PROTEIN MLN51 HOMOLOG 1 591 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 105 130 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 249 264 - -
Pvu5g1776 673 Coils Coil 61 90 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 460 476 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 379 410 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 141 206 - -
Pvu5g1776 673 PANTHER PROTEIN MLN51 HOMOLOG 1 591 IPR044796 GO:0003729|GO:0006397|GO:0035145
Pvu5g1776 673 PANTHER PROTEIN MLN51 HOMOLOG 596 673 IPR044796 GO:0003729|GO:0006397|GO:0035145
Pvu5g1776 673 MobiDBLite consensus disorder prediction 440 476 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 56 91 - -
Pvu5g1776 673 MobiDBLite consensus disorder prediction 14 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1776 Pvu-Chr5 39554434 39558860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1776 - - pvu:PHAVU_005G172200g 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1776 5 39554434 39558860 Pvu5g1776 5 39554434 39558860 ECH
Pvu5g1776 5 39554434 39558860 Pvu10g1571 10 42095565 42100330 PCT