Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1571 ATGGCTACCCCGGTTGAAGAAAACAACGTTGAGTATGATAGTGATCCTGAAGAGGCAACGAGACCGTTAACAATGCGGAGGCGCGAAGCAAGCGATGACGAAGAAGCCGAAGGGGAAGAAGTCACTGATAAGAGGGAAGATGGTAGAGTAGAGGTTCTTTCTAATGACTTAGATGATGAAGGTGGTGTTGAAGATTATGCGGATGATGGTGATGATGTTGAAGAAGCAGAAGAAGAATTGCAAGAAGAAGAAGAAGAGGAAGTTGAAGAAGTGTACGAGGAGAAGGGTGGAAGTGGTGGGGTTGAGGTTGAGGGTTCTGTGGTTGTGGCTAAGGAATCTGATGATGATGTCATACCCCCTTTGGAAGATTCCGTTGAGGACCTTTCCGAGGAGAAAAAGGAGTCTGATCCATTTTCGGTGCCCACAGCCGGAGCTTTTTACATGCACGATGACCGATTTAGGGACAATGCTGGTACCCGCAACAGATGGATACGTGGTGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAAGAAATGGGGACATGATAAATTTGAGCAAATTTTGCACGAAAGGCATTATGAGGAGAGGAGACCTTATAAGGGTAATTATCGTGGCCGTGGTAATGGTCGAGGCACTGAAGGAAGTAGGAAAGGGTATAGTAGCAGTAGCAATCAAAATCAGATGCCTAAGAGTGTTGTGAGAGGAAGAGGCCCCCAAAGGTATGAACGTACCAACAAAATCAATGGTCCATCTCCCCAAGTCCAAAATAAACAATCTGGGAAATCTCGTGAGAAAAACTCAAATGTTAGTTTCGAGAGGACTTCCACACCTTTCCATGCAGAATCTGACTCTGTGCCTGGTAAAAATCAAGTGCTTGCTTCAAATTTGAATTCAGCTTCCCCACCATATTACCCCTCTGGCTCTTCCAGCAATGATATTAATTTGACACAAAAAAGAGAGGTGCAAACGGGTGGCAGAAACAGTGGTCCTGTTATGGAAGAGGGTTTTCCAGTTCGACAAAAGAATGCTCTGATTCAGGGAAAGAATGATGTTGATTCCGTCAGCATGGCAAAGTTGCATATTAATGAATCCATCGCTCAATCTGTTGGAAAGCCTTCGAACAATGTGCGTATGGCACGGCCTGGGTCTTCTGGAGTCGATGCTTCTCAATCTCCTCACCTAAGGGCTTCTGGGACTGGGAGGGGTGTATCAATCCCAGTACAAACAAATTTTCAGCGTGCTACCTCACATAATAAAGTTTCTCCATCACAATTCCAGGCTATTCAGACAAGTTCTGTTCCAGGGAGGAATTCAACTTCTGTGCAAGCTACTGCCCCACAGTTGGGCCAAAGACCTGGCAGTGAGTCTCCATTGTCTTCCCCCTCCAGAAAATCCACGCCAACTAATTCACATGATTCTGGGGAATTGGATTCGGCGTCAGAATCAGGTAAAGGCAAAGGAGCTTTGGTTGGGAAGGGGAGGGGAGGTTCCCATGGCGCAGGCCGGGGAACTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGCAATGTAGGTGTTAGCCATGGAGATCCAAACTTCCCTGCCTTCTTGCCAGTCATGCAATTTGGGGGCCAGCATCCTGGTGGTATAGGAGTTCCTGCTGTTGGTATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTGGGAAAGTCAGAAATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACTTCAAGCAAGGACCATAGTGTTAACAAAGCTAATAATGAATTGAAGCCACCTCAGAGATCTGAGCTTTCAAGTGAAGAGTTTGGACAAAGGCATAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAGTGA 1956 0.4678 MATPVEENNVEYDSDPEEATRPLTMRRREASDDEEAEGEEVTDKREDGRVEVLSNDLDDEGGVEDYADDGDDVEEAEEELQEEEEEEVEEVYEEKGGSGGVEVEGSVVVAKESDDDVIPPLEDSVEDLSEEKKESDPFSVPTAGAFYMHDDRFRDNAGTRNRWIRGGGRRLWESKDDKKWGHDKFEQILHERHYEERRPYKGNYRGRGNGRGTEGSRKGYSSSSNQNQMPKSVVRGRGPQRYERTNKINGPSPQVQNKQSGKSREKNSNVSFERTSTPFHAESDSVPGKNQVLASNLNSASPPYYPSGSSSNDINLTQKREVQTGGRNSGPVMEEGFPVRQKNALIQGKNDVDSVSMAKLHINESIAQSVGKPSNNVRMARPGSSGVDASQSPHLRASGTGRGVSIPVQTNFQRATSHNKVSPSQFQAIQTSSVPGRNSTSVQATAPQLGQRPGSESPLSSPSRKSTPTNSHDSGELDSASESGKGKGALVGKGRGGSHGAGRGTFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKDHSVNKANNELKPPQRSELSSEEFGQRHNKPRRYSEMNFGQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1571 651 Coils Coil 63 94 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 245 325 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 366 500 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 1 143 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 597 651 - -
Pvu10g1571 651 PANTHER PROTEIN MLN51 HOMOLOG 1 651 IPR044796 GO:0003729|GO:0006397|GO:0035145
Pvu10g1571 651 MobiDBLite consensus disorder prediction 182 203 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 366 477 - -
Pvu10g1571 651 Pfam CASC3/Barentsz eIF4AIII binding 128 207 IPR018545 GO:0003729|GO:0006397|GO:0035145
Pvu10g1571 651 MobiDBLite consensus disorder prediction 597 625 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 182 335 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 57 92 - -
Pvu10g1571 651 SMART Btz_2 90 210 IPR018545 GO:0003729|GO:0006397|GO:0035145
Pvu10g1571 651 PANTHER PROTEIN MLN51 HOMOLOG 1 651 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 215 233 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 42 56 - -
Pvu10g1571 651 MobiDBLite consensus disorder prediction 14 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1571 Pvu-Chr10 42095565 42100330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1571 - - gmx:100792594 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1571 10 42095565 42100330 Pvu10g1571 10 42095565 42100330 ECH
Pvu5g1776 5 39554434 39558860 Pvu10g1571 10 42095565 42100330 PCT