Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1715 ATGGACAAAATCCATTCCAGGAGGCAGGTAGCTGCTATCAAACACTCCCTCTTTGATCAGGGATATTTGGATGAACAGTTTATCCAACTGGAAGAATTGCAGGATGATGCTAATCCTAACTTCGTTGAGGAAATTGTCACTCTTTACTACCGTGATTCCTCCAGGCTTATCTCAAACTTGGACCACACACTGGAAAGGAACCCTCTTGATTTCAACAAGCTGGACACAATTATGCACCAGTTTAAAGGAAGCAGCTCAAGCATCGGAGCTAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGAGAATATTGCAGGACAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAAAGAATATGCAACACTGAGAAAGAAACTTGAAACATATTTTCAGCTGGCTAGGCAAGCTGGGCCCCAGGAGACAGCATTTCGACCCAAGTAA 453 0.4327 MDKIHSRRQVAAIKHSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLDHTLERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRTRNGEGCRRSFQQMKKEYATLRKKLETYFQLARQAGPQETAFRPK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1715 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
Pvu5g1715 150 PANTHER - 5 146 IPR045871 GO:0000160|GO:0009927|GO:0043424
Pvu5g1715 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Pvu5g1715 150 Gene3D HPT domain 1 146 IPR036641 GO:0000160
Pvu5g1715 150 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 5 146 - -
Pvu5g1715 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1715 Pvu-Chr5 39106005 39107637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1715 K14490 - gmx:100800310 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1511 10 41655246 41662838 Pvu5g1715 5 39106005 39107637 ECH
Pvu5g1715 5 39106005 39107637 Pvu5g1715 5 39106005 39107637 ECH
Pvu5g1715 5 39106005 39107637 Pvu9g1148 9 16780152 16781675 ECH
Pvu5g1715 5 39106005 39107637 Pvu10g1511 10 41655246 41662838 PCT