Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1511 ATGATTGTATTGACATCTCTGCTGTCTTTTGGACATGCTGACAACTGCATTGATCCTAGACACCTGACATCTTTTTTTCTCTCCTATAAAACCCTTTCCCTTCACCTTCATTTCTCCACTCCCTTCAACCACCATAACCTTCTCTTCTCATTCTCACCCTTTTCCTCTTCTCCTTCACATTCTCTTCCAATGGACAGAAACCAATCCCGCAGGCAGGTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTTGATGAACAGTTTATCCAACTGGAGGAGTTGCAGGATGATGCAAATCCCAACTTTGTTGAGGAAATTGTGACTCTTCACTACCGTGATTCATCACGGCTAATCTCAAGCATAGAGCAGGCTCTCAAAGAGAGAAACCCTCTGGATTTTAACAAGCTGGACACTCTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGGGAATATTGCAGGGTGGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAATTGAAGAAAGAATATGCAGCACTCAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCTGGACCACAAGAAACAGCATGTCGCTCCAAATAA 645 0.4372 MIVLTSLLSFGHADNCIDPRHLTSFFLSYKTLSLHLHFSTPFNHHNLLFSFSPFSSSPSHSLPMDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRVGNAEGCMRSFQQLKKEYAALRKKLEAYFQLARQAGPQETACRSK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1511 214 Coils Coil 173 200 - -
Pvu10g1511 214 Pfam Hpt domain 113 191 IPR008207 GO:0000160
Pvu10g1511 214 Gene3D HPT domain 62 210 IPR036641 GO:0000160
Pvu10g1511 214 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 70 203 IPR036641 GO:0000160
Pvu10g1511 214 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 66 210 - -
Pvu10g1511 214 PANTHER - 66 210 IPR045871 GO:0000160|GO:0009927|GO:0043424
Pvu10g1511 214 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 101 197 IPR008207 GO:0000160
Pvu10g1511 214 CDD HPT 105 195 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1511 Pvu-Chr10 41655246 41662838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1511 K14490 - gmx:100798055 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1511 10 41655246 41662838 Pvu5g1715 5 39106005 39107637 ECH
Pvu10g1511 10 41655246 41662838 Pvu10g1511 10 41655246 41662838 ECH
Pvu10g1511 10 41655246 41662838 Pvu9g1148 9 16780152 16781675 ECH
Pvu5g1715 5 39106005 39107637 Pvu10g1511 10 41655246 41662838 PCT