Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1666 GTTGTGACTGTAGGAAAATTTCAAGGAGGTGGTGCTTTCAATGTTATTCCAGACTCTGTCACAATTGGTGGCACTTTCCGAGCTTTTTCAAGAGAAAGCTTCATGCAGCTGAGACGTCGGATTGAGCAGGTTATCATTGGGCAAGCTGCTGTGCAGAGATGCAATGCAACGGTCAACTTTCTTGACGAAGAGAAACCTTTCTTCCCCCCTACAGTGAACAATGGTGACTTGCATGAGTTCTTTAAAAGTGTTGCTGGGAGTTTAATTGGCGCTGACAAAGTTAAGGACTTGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGGTTTTCCCAGGATACTTCTTCCTCCTTGGAATGGAGGATGCCTCTGTTGAGCGTCTTGAGTTACCACACTCTCCATATTACAAAATCAATGAAGATGCACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCAACAAGGTATCTTCTCAAATTAAATCAAGACTTACCAGTAGTGGAGGAGAAGCATCATGATGAATTATAG 537 0.4302 VVTVGKFQGGGAFNVIPDSVTIGGTFRAFSRESFMQLRRRIEQVIIGQAAVQRCNATVNFLDEEKPFFPPTVNNGDLHEFFKSVAGSLIGADKVKDLQPLMGSEDFAFYQEVFPGYFFLLGMEDASVERLELPHSPYYKINEDALPYGAALHASLATRYLLKLNQDLPVVEEKHHDEL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1666 178 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 178 IPR017439 GO:0016787
Pvu5g1666 178 Gene3D Zn peptidases 27 178 - -
Pvu5g1666 178 Pfam Peptidase family M20/M25/M40 61 156 IPR002933 GO:0016787
Pvu5g1666 178 PANTHER AUXIN CONJUGATE HYDROLASE 1 178 - -
Pvu5g1666 178 SUPERFAMILY Zn-dependent exopeptidases 42 161 - -
Pvu5g1666 178 SUPERFAMILY Bacterial exopeptidase dimerisation domain 1 69 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1666 Pvu-Chr5 38670869 38672151 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1666 K21604 - gmx:100794121 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1666 5 38670869 38672151 Pvu10g1484 10 41460548 41463479 PCT