Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1639 ATGACAGACAGGGTGTACCCTTCGGCGAAACCAGCCGCCGCCGCCGCCGCCAACCCTGCTTTTCCAGCAACAAAGGCCCAACTCTACGGCGCCACACGCCCCACCTACCGCCCGCAGCCTCACCACCGGCGCCGGAGCAAGCGCCGGTGCTGCTGCACCTTCTGCTTCTGGCTGATCCTCACCGTGCTCGTCCTACTCCTCTTGCTCGGCATCGCCGGCACGGTGTTCTACCTGCTCTACCGCCCCCACCGCCCCACCTTCACCGTGACGTCGCTGAAGCTTTCGTACCTGAACCTGACTTCCTCCTCCGCCCTGAACTCCCGCTTCGACGTCACGGTCTCCGCCACCAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCTCCATCTCCATCCTCTCCGGCAGCGTCGACGTCGGCGACGGCACCGTCCCCGCCTTCCTGCACGGCAAGAAGAACACCACGCTCATCAGAACCTCCATTGTGACCACCCGCCACCCGCTCCAGAGCGAGGACGCGTCACAATTGAAGTCCAGCATGAAGAGCAAGAACGGGTTACCGCTGAAGGTGAATTTGGAGACGAAAGTTAAGGCCAAAATGGGAAATTTGCAAACCCCAAAGGTCGGAATCAGAGTCTCATGCGACGGAATCAGAGTGACTCTTCCCTCCGGCAAGAAACCGGCGACGGCGTCCACCTCGAACGCCAAGTGCAACGTGGATGTTAGGTTCAAGATCTGGAAGTGGACGGTTTGA 756 0.6058 MTDRVYPSAKPAAAAAANPAFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTFCFWLILTVLVLLLLLGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTSSSALNSRFDVTVSATNPNKKILFAYDPTSISILSGSVDVGDGTVPAFLHGKKNTTLIRTSIVTTRHPLQSEDASQLKSSMKSKNGLPLKVNLETKVKAKMGNLQTPKVGIRVSCDGIRVTLPSGKKPATASTSNAKCNVDVRFKIWKWTV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1639 251 Pfam Late embryogenesis abundant protein 112 215 IPR004864 -
Pvu5g1639 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 250 - -
Pvu5g1639 251 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 11 250 - -
Pvu5g1639 251 SUPERFAMILY LEA14-like 66 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1639 Pvu-Chr5 38463426 38465441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1639 38 237 EF-hand Containing Proteins AT5G21130 28.502 4.84e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1639 - - gmx:100819194 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1639 5 38463426 38465441 Pvu10g1441 10 41082371 41083108 PCT