Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1441 ATGACTGATAGGGTTCATCCTTCTGCCAAAACCACCAAGCCAACATTCCCGGCAACAAAATCCCAGCTTTCTGGCGCCAATCGCCCCACCTACCGCCCCCAACCGCCCCGCCGCCGCAGCAGCCGCGGCTGTGCTTCCACCCTCTGCTGCTACCTCCTCCTCATCCTCCTGCTCCTCCTCCTCCTCATTGGCGGCGCCGGAACCGTCTTCTACTTCCTCTGCCACCCCCAACGCCCCTCATTCTCCGTCACCTCCCTCAAACTCTCCTACTTCAACCTCACCTCTCCCTCCACCTTCAAGGCCAGCTTCGACCTCACTCTCTCAACTACCAACCCCAACCACAACATCCTCTTCTCCTACGATCCCACTTCCGTCTCCCTCCTTTACGCCGACGCCACGCTCGCCACCGCCACCATCCCCTCTTTCCTCCACCACCAGAGGAACACTACCGTGCTCCAGGCCCACGTCACCAGCACCGAGGAAGAGGTGCAGAGCGACACCGTGACGGAACTCAAGAGGAGCGCGAAGAGCAAGAGCGAGGTGGCGCTAAAGGTGAAGTTGGAGACGAAGGTGGAGGCCCAGATGAGCGTACTCCAAACCCCCGGCGTCGGAATCACCGTTTTATGCGACGACATCGCCGTGACTCTCCCCGACGGCGAGAAACCGGCGTCGGCGTCGGTAGAGAATACGGCGTGCGAAGTGGATGTGAGGTTCAAAGTCTGGAAATGGACCGTATAA 738 0.6003 MTDRVHPSAKTTKPTFPATKSQLSGANRPTYRPQPPRRRSSRGCASTLCCYLLLILLLLLLLIGGAGTVFYFLCHPQRPSFSVTSLKLSYFNLTSPSTFKASFDLTLSTTNPNHNILFSYDPTSVSLLYADATLATATIPSFLHHQRNTTVLQAHVTSTEEEVQSDTVTELKRSAKSKSEVALKVKLETKVEAQMSVLQTPGVGITVLCDDIAVTLPDGEKPASASVENTACEVDVRFKVWKWTV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1441 245 Pfam Late embryogenesis abundant protein 106 203 IPR004864 -
Pvu10g1441 245 Gene3D - 73 202 - -
Pvu10g1441 245 MobiDBLite consensus disorder prediction 1 42 - -
Pvu10g1441 245 SUPERFAMILY LEA14-like 56 160 - -
Pvu10g1441 245 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 8 244 - -
Pvu10g1441 245 MobiDBLite consensus disorder prediction 7 29 - -
Pvu10g1441 245 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1441 Pvu-Chr10 41082371 41083108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1441 31 233 EF-hand Containing Proteins AT5G21130 26.168 2.36e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1441 - - gmx:102669753 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1441 10 41082371 41083108 Pvu10g1441 10 41082371 41083108 ECH
Pvu5g1639 5 38463426 38465441 Pvu10g1441 10 41082371 41083108 PCT