Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1615 GCTATCGAGAACAAGAAGTTGTTCATCTTGGATCACCATGACTATCTCATTCCATATTTGAGGAGAATAAACTCATCTACCACAAAGACTTATGCTACAAGAACCATCTTTTTCTTGAAAGATGATGGAACATTGGCACCACTAGCCATTGAGTTAAGCAAGCCACATAGTCAGGGTGACGAGCATGGTCCTGTCAGCGAAGTCTATGTGCCTGCATACGAGGGAGTTGAAGCTTACATTTGGTTACTGGCAAAGGCTTATGTTGTTGTGAACGACTCATGCTACCATCAAATCGTTAGCCATTGGCTAAACACTCATGCGGTTGTTGAGCCTTTCGTGATAGCAACAAACAGGCAACTGAGTGTGGTTCACCCTGTTTACAAACTCCTGTTTCCTCACTATCGTGACACCATGAACATCAATTCGCTTGCCCGCAAGTCCTTGGTGAATGCAGACGGTATCATAGAGAAAACATTCTTGTGGAGTAGGTACTCTATGGAAATGTCCTCTGTGATCTACAAGGATTGGTCTTTGGTTGATCAAGCCTTACCCAATGATCTCATCAAGAGAGGAGTTGCAGTTGCAGATCCATCTGCTCCCCACGGTGTTAAGCTTGTGATTGAGGATTATCCTTATGCTTCTGATGGGCTAGAGATATGGGATGCCATCAAGTCCTGGGTGGAGGAGTATGTGGCGTTCTACTACAAGTCAGACGAGGCACTTCAGAAAGACCCTGAACTCCAAGCATGGTGGAAAGAACTAGTTCAGGTGGGTCATGGTGATTTGAAAGACAAGCCATGGTGGCCAAAGATGCAATCACGTGGAGATTTGGTTGCAGTCTCCACTACCTTGATTTGGATAGCTTCAGCTCTTCATGCAGCTGTTAACTTTGGACAGTATCCATATGGTGGTTTAATCCTGAACAGGCCAACAATTAGCAGAAGATTCATGCCTGTGGAAGGGTCTGCTGAGTATGCTGCATTGGCTAAGAATCCTGAGAAGGAGTTTTTGAGGACTATTACTGGGAAGAAAGAGACCCTGATAGACCTGACAGTGATAGAGATATTGTCAAGGCATGCATCTGATGAGATATACCTGGGAGAGAGAGATGGTGGTGACCATTGGACTTCTGATGCAGGGCCATTGGAGGCATTTAAGAGGTTTGGAAAGAAGCTTGCAGAGATTGAAGAGAAGCTTGTGAAGAAGAACAATGATGAGACATTGAGAAACAGAACTGGGCCAGCTAAAATGCCTTATACTCTGCTGTATCCTTCAAGTGAAGAGGGGTTGACTTTCAGAGGAATTCCGAACAGTATCTCCATCTAA 1326 0.4472 AIENKKLFILDHHDYLIPYLRRINSSTTKTYATRTIFFLKDDGTLAPLAIELSKPHSQGDEHGPVSEVYVPAYEGVEAYIWLLAKAYVVVNDSCYHQIVSHWLNTHAVVEPFVIATNRQLSVVHPVYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWSRYSMEMSSVIYKDWSLVDQALPNDLIKRGVAVADPSAPHGVKLVIEDYPYASDGLEIWDAIKSWVEEYVAFYYKSDEALQKDPELQAWWKELVQVGHGDLKDKPWWPKMQSRGDLVAVSTTLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMPVEGSAEYAALAKNPEKEFLRTITGKKETLIDLTVIEILSRHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEEKLVKKNNDETLRNRTGPAKMPYTLLYPSSEEGLTFRGIPNSISI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1615 441 PRINTS Lipoxygenase signature 78 95 IPR013819 GO:0016702|GO:0046872
Pvu5g1615 441 PRINTS Lipoxygenase signature 96 113 IPR013819 GO:0016702|GO:0046872
Pvu5g1615 441 PRINTS Lipoxygenase signature 116 136 IPR013819 GO:0016702|GO:0046872
Pvu5g1615 441 SUPERFAMILY Lipoxigenase 1 441 IPR036226 -
Pvu5g1615 441 Pfam Lipoxygenase 1 424 IPR013819 GO:0016702|GO:0046872
Pvu5g1615 441 PRINTS Plant lipoxygenase signature 31 55 IPR001246 GO:0016491
Pvu5g1615 441 PRINTS Plant lipoxygenase signature 353 367 IPR001246 GO:0016491
Pvu5g1615 441 PANTHER LIPOXYGENASE 1 441 IPR000907 GO:0016702|GO:0046872
Pvu5g1615 441 ProSitePatterns Lipoxygenases iron-binding region signature 1. 96 110 IPR020833 GO:0016702|GO:0046872
Pvu5g1615 441 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 1 441 - -
Pvu5g1615 441 Gene3D - 74 440 - -
Pvu5g1615 441 ProSitePatterns Lipoxygenases iron-binding region signature 2. 123 133 IPR020834 GO:0016702|GO:0046872
Pvu5g1615 441 Gene3D - 1 73 - -
Pvu5g1615 441 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 441 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1615 Pvu-Chr5 38256786 38258499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1615 1 441 Acyl Lipid Metabolism Gene Families AT3G22400 62.108 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1615 K15718 - gmx:547836 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1615 5 38256786 38258499 Pvu10g1402 10 40692610 40698355 PCT
Pvu10g1404 10 40744561 40745095 Pvu5g1615 5 38256786 38258499 PCT