Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1404 ATGGATCTTACAGTGATGGAGATACTATCAAGGCATGCATCTGACGAGGTATATCTTGGACAAAGGGACACCTTGGACTGGACTGCTGATCAAAAGGCAAAAGATTTGTTCAAAAAATTTACAGAACAGCTGAAAGACATTGAGAGCAAGATCTCTGAAAGGAACAACAACAAAGAACTTAGAAACCGAACTGGACCGGTGAAATTGCCCTACACTGTGCTTCTTCCTTCGAGTGAACCAGGGATTACTTTCAGAGGAATCCCTAACAGTGTCTCTATCTAA 282 0.4184 MDLTVMEILSRHASDEVYLGQRDTLDWTADQKAKDLFKKFTEQLKDIESKISERNNNKELRNRTGPVKLPYTVLLPSSEPGITFRGIPNSVSI* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1404 93 PANTHER LIPOXYGENASE 1 93 IPR000907 GO:0016702|GO:0046872
Pvu10g1404 93 Coils Coil 37 57 - -
Pvu10g1404 93 Pfam Lipoxygenase 3 76 IPR013819 GO:0016702|GO:0046872
Pvu10g1404 93 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 93 IPR013819 GO:0016702|GO:0046872
Pvu10g1404 93 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 1 93 - -
Pvu10g1404 93 Gene3D - 1 92 - -
Pvu10g1404 93 SUPERFAMILY Lipoxigenase 3 93 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1404 Pvu-Chr10 40744561 40745095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1404 1 93 Acyl Lipid Metabolism Gene Families AT1G55020 59.140 3.77e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1404 K15718 - pvu:PHAVU_010G135100g 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1404 10 40744561 40745095 Pvu5g1615 5 38256786 38258499 PCT