Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1595 ATGGCGAACCCATCTGGGAACCATCAAGAGCACACGCACGTGTCGTCTTCTGCTCCAGAGACGTCCGGTGCGGCTCTCGCCATGAAGCACAACCCTGGTATCTCACTCGATTGGACTGCCGAAGAACAAGCCATTCTCGAAGATGGACTCTCCAAGTATGCCTCAGAATCCAACATAGTACGCTATGCGAAGATTGCCCTACAGTTACAGCATAAAACAGTTCGTGATGTAGCACTGCGAGTCAGGTGGATGAATAAGAAAGAAAATAGCAAGAGAAGGAAGGATGATCATAATTTAGCTCGGAAAAGTAAAGATAAAAAGGAAAGGGTTTCTGATCCTGCAGTGAAGTCATCCAGCTTTGCTGCTCGGTCCAATGTCTCTCCTTATGCTCCACCAATGATTACAATGGACAACGATGATGGCATCTCTTATACAGCAATTGGTGGTCCCACCGGTGAGCTATTAGAGCAAAATGCACAGGCCTTGAATCAAATCTCCACAAATCTTTCTGCTTTCCAGGTACAGGAGAACATCAATCTTTTCTGCCAAACTAGAGACAACATCCTTAAAATTGTGAACGAGTTAAATGATTCACCAGAGGTGATGAAGCAAATGCCACCTCTTCCTGTGAAGGTGAATGAAGAGCTAGCCAATTCCATACTTCCAAGAACAGCTCTCCCTCCACAATCATCATAA 696 0.4526 MANPSGNHQEHTHVSSSAPETSGAALAMKHNPGISLDWTAEEQAILEDGLSKYASESNIVRYAKIALQLQHKTVRDVALRVRWMNKKENSKRRKDDHNLARKSKDKKERVSDPAVKSSSFAARSNVSPYAPPMITMDNDDGISYTAIGGPTGELLEQNAQALNQISTNLSAFQVQENINLFCQTRDNILKIVNELNDSPEVMKQMPPLPVKVNEELANSILPRTALPPQSS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1595 231 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 22 224 - -
Pvu5g1595 231 CDD SANT 38 87 IPR001005 -
Pvu5g1595 231 MobiDBLite consensus disorder prediction 88 121 - -
Pvu5g1595 231 PANTHER BNAC03G35350D PROTEIN 22 224 - -
Pvu5g1595 231 Gene3D - 38 112 - -
Pvu5g1595 231 MobiDBLite consensus disorder prediction 1 22 - -
Pvu5g1595 231 MobiDBLite consensus disorder prediction 1 23 - -
Pvu5g1595 231 MobiDBLite consensus disorder prediction 88 113 - -
Pvu5g1595 231 Pfam Protein of unknown function (DUF3755) 171 204 IPR022228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1595 Pvu-Chr5 38132207 38137602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1595 - - gmx:100819879 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1595 5 38132207 38137602 Pvu11g0540 11 4472557 4475779 PCT