Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0540 ATGACCACCCGTAGAGTGTGTTTGTTTCCATGGAGGAGGAGGGAGAGGGTGCTTTTTGTGTTTGTTTCAAGGGTTTTGAGGGTGGGGGAGTGGATGGGGGAGATGGAAAAGGCTACAGATCCTGCAGTGAGGTCATCTCACTTTACTGCTCAATCTAATGTTTCCCTATATGCTCCTGCAATGAAGATGATAGACAATGATGACAGCATCTCTCATAAAGCTATTGGAGGCCCTGCAGGTGAGCTCTTAGAGCAAAATGCACAGGCCTTGAATAACATTTCTACCAATCTTGCTGCTCTTCAGTTTCAGGATAACATCAATCTTTTCAGCCAAACGAGAGACAACATCATCACAATTTTGAATGACATGAATGACATGTCAGATATAATGAAGCAAATGCCACCTCTTCCTTTGAAGATCAATGAAACTATACTCAACTCCATATTTCCAAAAACAATTCACCAGATGCTATAA 474 0.4198 MTTRRVCLFPWRRRERVLFVFVSRVLRVGEWMGEMEKATDPAVRSSHFTAQSNVSLYAPAMKMIDNDDSISHKAIGGPAGELLEQNAQALNNISTNLAALQFQDNINLFSQTRDNIITILNDMNDMSDIMKQMPPLPLKINETILNSIFPKTIHQML* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0540 157 PANTHER BNAC01G39810D PROTEIN 35 156 - -
Pvu11g0540 157 Pfam Protein of unknown function (DUF3755) 100 132 IPR022228 -
Pvu11g0540 157 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 35 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0540 Pvu-Chr11 4472557 4475779 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0540 - - pvu:PHAVU_011G052600g 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1595 5 38132207 38137602 Pvu11g0540 11 4472557 4475779 PCT