Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1588 ATGCACCAGATTCTCTCCAAGACTTCATCTGCTATGGCCACTTTTCCTTGTTCCAGGGTGAGAAGTGGGTTATGCGTGTGGCCAAATGTTAGACAACTTTGCTTTAGAAAAGGCATTCTGTATGGATTTATGCGATTGTTTTCTACACCATTGAAAACTCTGCGTGGAGCAAGTCGCACGCTGAGGGTGGCTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTGAAGGACAATTATGCGTATCTTTTACATGATGTGGATACGGGTACGGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTGTCATAGATGTCCTGAGCAGGAAAAATCGAAATTTAACATACATACTCAACACTCACCATCATCATGATCACACTGGTGGAAATGTAGAATTGAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGCATTGATATCCATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACACCTGGTCACACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACAGGAGACACTTTGTTCAGCTTATCATGTGGCAAGCTGTTTGAAGGAAGCCCTAAGGAGATGATGTCTTCTCTTAAAAAGATCATGTCCCTGCCAGATGATACAAATATATACTGTGGACACGAGTATACATTGAACAATACAAAGTTTGCATTGTCCATCGAACCTGAAAACAAAGAACTTCAATCCTATGCTGCTCATGTAGCTTACCTTCGAAGTAAAGGCTTGCCCACAATTCCCACCACACTGAAGGTGGAAAAGGCTTGTAATCCATTCCTGCGTACATCCAGTGGTGCAATCAGGCAATCATTAAATATTGCAACCACAGCAAATGATGCAGAAGCTCTTGCTGTCATCCGGCAAACAAAGGATAATTTTTAG 990 0.4293 MHQILSKTSSAMATFPCSRVRSGLCVWPNVRQLCFRKGILYGFMRLFSTPLKTLRGASRTLRVAQFCSVANMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVVDPSEAVPVIDVLSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPKEMMSSLKKIMSLPDDTNIYCGHEYTLNNTKFALSIEPENKELQSYAAHVAYLRSKGLPTIPTTLKVEKACNPFLRTSSGAIRQSLNIATTANDAEALAVIRQTKDNF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1588 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Pvu5g1588 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 329 IPR036866 -
Pvu5g1588 329 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
Pvu5g1588 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Pvu5g1588 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Pvu5g1588 329 Gene3D - 76 329 IPR036866 -
Pvu5g1588 329 Pfam Metallo-beta-lactamase superfamily 89 244 IPR001279 -
Pvu5g1588 329 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 329 - -
Pvu5g1588 329 PANTHER BETA LACTAMASE DOMAIN 4 329 - -
Pvu5g1588 329 SMART Lactamase_B_5a 86 244 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1588 Pvu-Chr5 38075190 38077996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1588 K01069 - gmx:100816314 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1588 5 38075190 38077996 Pvu5g1588 5 38075190 38077996 ECH
Pvu5g1588 5 38075190 38077996 Pvu11g0545 11 4513649 4517082 PCT