Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0545 ATGAGTCAAACTAAGGAAAGAAGTGGGTTTTGCGTGTGGCCGGATGCGAGACAACTTTGCTTGAGGAAAGGTCTTTTATATGGATTTATGCGATTATTTTCTATACCGTTAAAAACTTTGCGTGGGGCTAGTCGCTCGTTGAGAGTAGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCACTGCAGATTGAATTGGTTCCATGCCTTAGGGACAGTTATGCTTATCTTTTACATGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCTGAAGCTGCGCCTATTATAGATGCTTTGAGTAAGAAAAATCTAAATTTGACTTACATACTGAACACTCACCACCATCATGATATCACCAGTGGAAATGTAGAGTTGAAAGAAAGGTACGGGGCAAAGGTAATTGGCTCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATTTATTTGAGTGATGGAGATAACTGGATGTTTGCAGGTCATGAGGTGCATATATTAGCCACTCCTGGTCACACTGAAGGTCATGTAAGCTTCTACTTTCCAGGATCGGCAGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGCGATCTCTTTGAAGGAACCCCTGAACAGATGCTATCTTCTCTTAAAAGGATTATGTCGTTGCCAGATGACACAAGTATTTACTGCGGTCATGAATATACATTGAATAATTCAAAGTTTGCCTTGTCCATAGAACCACAAAACAAGGAACTTCAATCCTATGCTGCCCACGTAGCTCACATTAGAAATAAGGGCTTGGCCACGATTCCAACTACGCTGAAGATGGAAAAGGCTTGCAATCCGTTTCTTCGCACATGGAGCATGGAAATCCGGCAAAAACTAAATATTGCAGCCACAGCAGAAGAAGCAGAAGCCCTGCGTGTTATTCGGCAAGCAAAGGATAAATTTTAG 948 0.4146 MSQTKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDSYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKNLNLTYILNTHHHHDITSGNVELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVSFYFPGSAAIFTGDTLFSLSCGDLFEGTPEQMLSSLKRIMSLPDDTSIYCGHEYTLNNSKFALSIEPQNKELQSYAAHVAHIRNKGLATIPTTLKMEKACNPFLRTWSMEIRQKLNIAATAEEAEALRVIRQAKDKF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0545 315 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Pvu11g0545 315 PANTHER BETA LACTAMASE DOMAIN 4 315 - -
Pvu11g0545 315 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 315 IPR032282 -
Pvu11g0545 315 Gene3D - 62 315 IPR036866 -
Pvu11g0545 315 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 308 IPR036866 -
Pvu11g0545 315 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 315 - -
Pvu11g0545 315 Pfam Metallo-beta-lactamase superfamily 73 230 IPR001279 -
Pvu11g0545 315 SMART Lactamase_B_5a 72 230 IPR001279 -
Pvu11g0545 315 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 65 315 IPR017782 GO:0004416|GO:0019243
Pvu11g0545 315 PIRSF Glx 57 315 IPR017782 GO:0004416|GO:0019243
Pvu11g0545 315 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 315 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0545 Pvu-Chr11 4513649 4517082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0545 K01069 - gmx:100805615 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1588 5 38075190 38077996 Pvu11g0545 11 4513649 4517082 PCT