Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1512 ATGCCTGAACGTCCCTACAAACATATTGATATTGCAAGAAGTCCTACCAGCGTGGCTAGCGTGGAACATGTCCTCCGAGGTGCAGGAGGGGATTCTGCTAGGTTCTCACCAACCTACTCTTCGAACTGCTCTTCCCCTTCCTCTCCGTGGAAGCAACAGGATGCAGAAGAAGACCATGGCCTCTATCAGAAGAGATCAGTTCTCACCAAAGTGAAGCAAAAAGCCAGGAAATTCTGCAACAGCCTCAGCAAGAGAAGAATGGAGGACGAGAATGTCACACCCCCTTGGGGTGCTAGGTTAGAAGATGACGAGGAGGAAGAAGAAGAAGACCCTGAATACCTTGGAGCTCCTATGTATGAATCAGAGCTGGCACCTGAGGCATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAAGCATGTTTTGCACAACAATATCAGACTAGGAATGCAGCAAGATCGAGAAAAACCACGTGCTTCTATCAATCACAACCTCAAGTCAATGACTCAACTTGATACAACAATAGCAACCACAAGAACATCGTCTCCAAACAAGGCCTCCGAAACCTTAGCTGACAAACTGATACCTGTCTATGCTGGAGGGTCGCTTGCAGCCAATTCTGTATCCTCCAAAATTCAATCTGCAGTTTCCAAACATCCCCTTACAGCCAACACCATGCCCTCCCAAAATGCATCTGCTTCATCATCTCGGCTGCTAAATTCACCTTCCTTATCTGCTTCACAGAGTAGGAAGAACACAACCCAAAACGGTGCTTCAATGGATAATTATTTGATGAACAAGTCTGTATATGAGGAGGATGCCAAAACTATGTCTCCAAAGCAAGATTTATCATCTTCTTCTGCTTCACTGGGTGGAAAGTACGCACAAAAGGGTGTTTCACTCAGAAATAATTCGATGAACAGATATGAACAAGGAAATGAAACCAGAACTATGACTCCCTTGCAAAAATCCTCATCCTTTTCAGCTGCTTCAATGAGTGGGAAAAACACATCCCAAAAGGGTGCTTCAACCAAAGATTATTCACTGAGCAGGTTTGAGAGAATGGATAATGAAAGAACTGCGTCTCAACTTCAGGGTCCAAGCAGAAGTTCTAGTAATGCAGGCATGATGGACAAGGTGAGAGGAGCTGTAAATTCATTGCTGGGGAATGAGGAGCCATCACAAACTCAACAAGGTGATGAGGATGAAAACCGTGGGAGAATTCTACAGGCAAATTAA 1257 0.4463 MPERPYKHIDIARSPTSVASVEHVLRGAGGDSARFSPTYSSNCSSPSSPWKQQDAEEDHGLYQKRSVLTKVKQKARKFCNSLSKRRMEDENVTPPWGARLEDDEEEEEEDPEYLGAPMYESELAPEAYKENARQHPRANPVISEKHVLHNNIRLGMQQDREKPRASINHNLKSMTQLDTTIATTRTSSPNKASETLADKLIPVYAGGSLAANSVSSKIQSAVSKHPLTANTMPSQNASASSSRLLNSPSLSASQSRKNTTQNGASMDNYLMNKSVYEEDAKTMSPKQDLSSSSASLGGKYAQKGVSLRNNSMNRYEQGNETRTMTPLQKSSSFSAASMSGKNTSQKGASTKDYSLSRFERMDNERTASQLQGPSRSSSNAGMMDKVRGAVNSLLGNEEPSQTQQGDEDENRGRILQAN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1512 418 MobiDBLite consensus disorder prediction 28 59 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 228 269 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 100 115 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 85 137 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 85 99 - -
Pvu5g1512 418 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 18 286 IPR037491 GO:0009737
Pvu5g1512 418 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 287 406 IPR037491 GO:0009737
Pvu5g1512 418 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 287 406 - -
Pvu5g1512 418 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 18 286 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 34 51 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 228 418 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 285 352 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 365 381 - -
Pvu5g1512 418 MobiDBLite consensus disorder prediction 404 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1512 Pvu-Chr5 37455056 37457053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1512 - - vra:106758277 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1512 5 37455056 37457053 Pvu11g0636 11 5366034 5367941 PCT