Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0636 ATGGCTCAACTCGAACGCCCTCAGAGACAGGTTGAAACTACAAAAGCTCCACCTACCATCCACACCATGGAACAACTCCTCCGAGGGGAGTCCTCCAAGTCTAGTAGGCAGTCACCAACCTCCCCCTCCTCCAACTTGTCTTCCCCAAACTCCCCTTTCTTCCAAAGGTTGAGGTCTCATGACTCAGAAGACGACCATTCCCAGAATCAGAAGAAATCAGTTCTCACCAAAGTCAAGGAGAAGGCCAAAAAGCTACGCCACAGCCTCAGCAAGAAAAAGCATGAGGACGGGAGCCTCAGTAGTCCCTCATCTGCTACTGCCGCAGAAGCTGATGCAGTAGAAGAAGATGCTGAATTTCTCGGAGCTCCTATGTACGAATCAGAGAAGGCACCTATAGGGTACAAAGCAAATGCAAAGCCGCTTATAAGTCCAAGAGCAAATTATGTGATCCCTGAGAAGCATGTTATATCAAGCAGTGACAAACATGTAGTCGAACAAGATCATGAAAAGTCACTAACCCGTTCCTTATCCAAGAGAACAACACAACCTGCAGCAACAATAGCAACCACCACTTCATATGCCACCCCTGCTTCTAATATTAATATTAACACTAGAAGAAATACTAGTACTCCTTCCGGTCCAATCAAGACAACCACTGAAACAGTAGCCCCTAAACTGTCAGCAGTTCAAGTTGAAAAACCAGATGCCGCCCATGTAACCTCCAAATTTCAAGGTCTTACTGTGTCCAAACCCTCAGAGCTTCATGATCATCCTTCTTCATCATCATCACCATTATCATCATCATCATTACCAACATCAACAGTTGCACCAAAAACAATTCGCAACACTTCTTTGTCCTATTCTGCTCCTCGTACTCCCCCTGTAAGAGTAACTTCCCAGTTTCCTACAACCACTCCGCGAACTACATCAGCTCCAGTGACTCCAGCACCATCACCTGCTACCCCACTGAGTGCGAAGAGCACAAGCCCCACCGCGCAGATATGGGATAAGGGTGTGTCCATGAAAGAGTACTTGTTGACCAAATTGGAGCCGGGGGAAGATGAGAAGGCGCTGTCTCAGGTGATATCTGAAGCAATGAGTCCTAGGAGAACTCCTGGTGATGCAGGCGTGATGGAGAAGGTGAGAGAAGCTGTCACTTCTTTGCTCCGAACTGAGCAGCCTGCAAAATATGCAGACGAAACTACTGCGGCTACTACTACCAGTACTGCTCGTATGTCACCTCAAAGCCCAGTATCTACCAACGCTTCTCGCGCTTCTTCTCAAATGCCATCATCTTCCAATGCTTCTCGTGCTTCGTCTCAAATGCCAGCATCTACCGGTGTTTCTCGCACTTTATCTCAAATCCCTGTATCTTACAACGCCCAGCAAGAGTATACAGTGGCCCAGGAAGAAAACCATGGCCGAATTCTTCAGACAAATTGA 1443 0.4733 MAQLERPQRQVETTKAPPTIHTMEQLLRGESSKSSRQSPTSPSSNLSSPNSPFFQRLRSHDSEDDHSQNQKKSVLTKVKEKAKKLRHSLSKKKHEDGSLSSPSSATAAEADAVEEDAEFLGAPMYESEKAPIGYKANAKPLISPRANYVIPEKHVISSSDKHVVEQDHEKSLTRSLSKRTTQPAATIATTTSYATPASNININTRRNTSTPSGPIKTTTETVAPKLSAVQVEKPDAAHVTSKFQGLTVSKPSELHDHPSSSSSPLSSSSLPTSTVAPKTIRNTSLSYSAPRTPPVRVTSQFPTTTPRTTSAPVTPAPSPATPLSAKSTSPTAQIWDKGVSMKEYLLTKLEPGEDEKALSQVISEAMSPRRTPGDAGVMEKVREAVTSLLRTEQPAKYADETTAATTTSTARMSPQSPVSTNASRASSQMPSSSNASRASSQMPASTGVSRTLSQIPVSYNAQQEYTVAQEENHGRILQTN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0636 480 MobiDBLite consensus disorder prediction 1 56 - -
Pvu11g0636 480 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 27 480 IPR037491 GO:0009737
Pvu11g0636 480 Coils Coil 75 95 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 388 451 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 176 225 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 157 331 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 398 451 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 57 76 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 157 175 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 242 311 - -
Pvu11g0636 480 MobiDBLite consensus disorder prediction 1 114 - -
Pvu11g0636 480 PANTHER LOW-TEMPERATURE-INDUCED PROTEIN 27 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0636 Pvu-Chr11 5366034 5367941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0636 - - var:108319604 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1512 5 37455056 37457053 Pvu11g0636 11 5366034 5367941 PCT