Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1505 ATGATAAGCCTTATTCCTTCATCAGCGGCATTTTCTGTCGCAACTCTCTTTGTCTCAAGCTTCCTTTGGACCATCCCTAAGTCTGTGCTGTCTGCTACTTCAAACTATGGAGCCGTTACTAGGCACTACCAATTCGATATAAGGCTGAAAAACATTACTAGGCTGTGCCACACTAAGAACGTGGTTACTGTAAATGGAAAGTTCCCGGGACCTCGTGTTATTGCCAGAGAAGGAGACAGATTAGTGGTTAAGGTGATCAACCATGTTCCAAACAATATCACCATTCATTGGCACGGAGTGAGACAGCTACGTAGTGGATGGTCGGATGGACCATCGTACATAACTCAATGTCCCGTACAAAGTGGTCAGAGTTATATGTACAACTTCAGCTTGGTTGGGCAAAGAGGAACTCTCTTCTGGCATGCACACCATTCCTGGTTAAGGGCTACTCTCTATGGACCCCTCATCATCCTCCCAAGGAGCAACGAATCTTACCCGTTTGCCAAACCCTACAAGGAAGTTCCCATCCTCTTTGGAGAGTGGTGGAATGTGGATCCGGAAGCAGTGATTGCACAAGCTCTTCACACAGGGGGTGGTCCTAATGTCTCTGATGCCTACACCATGAACGGACTTCCTGGGCCCCTCTACAATTGCTCCAGTGACGATACATTCAACCTCAAGGTGAAACCAGGGAAGACATATCTTCTACGTTTGATCAACGCTGCAGTGAATAATGAACTCTTTTTCAGCATCGCAAACCACACCATGACAGTTGTTGAAGCCGATGCTGCATATGTTAAACCCTTCAACTCCGACATCATCGTCATTGGTCCCGGACAAACCACAAACGTGGTGTTAAAGACAAAACCTGAGTACATAAATGCTACTTTCTTCATGCTAGCGAGACCATTTTTCAATGGTAAGGGTACCTTCGACAATTCCAAGTTAGCTGGCATTCTAAAATACGAAAACAACGACAACGACAACCCTCCTTCGGAACCAGATTTGAAAAACCGTACCCTACTGAAACCAACGCTTCCTGCTTTCAACGACGCATCCTTCGTTGCAAATTTCAGTCGTAAATTTCGGAGTTTGAACAGCGCAGAATACCCTGCGAATGTTCCTCAAAGAGTTGACAGGAGTTTCTTCTTCACAATAGGTCTCGGGAGCATTCCCTGTCCGAGAAACCAAACGTGTGAAGGGCCTAATAAGAGAACTAAATTCGCTGCTTCCATGAACAACATATCTTTCAATCTCCCTTCGGTGGCAATTCTTCAACAGCATTTCTCAGGGCAGGATAATAGTGTTTACACCACGGACTTCCCAGTTGTTCCTCTGAGACCCTTTAACTACACGGGGACTCCACCGAACAACACCATGGTGAAGAGTGGAACCAAAGTGGTGGCGATACCCTACAACACCAGAGTGCAGGTTGTGTTGCAGGACACTAGCATTTTGGGAGCGGAGAGTCATCCGTTGCATCTTCATGGATTCAATATGTTCGTGGTGGGTCAAGGTTTTGGGAACTTTGATCCCATGACAGACCCTCTCAACTTTAATCTGGTGGACCCTGTTGAGAGGAACACCATTGGCGTGCCTTCTGCTGGTTGGGTTGCAATTCGCTTTCTTGCTGACAACCCAGGTGTTTGGCTGATGCACTGCCACATTGATTTGCACCTGAGTTGGGAGTTGAGGATGGCTTGGATTGTGAACAACGGAAAACTCTCTCATCAGAAGTTGCCTCCTCCACCGTCTGATCTCCCAAAGTGTTGA 1773 0.4676 MISLIPSSAAFSVATLFVSSFLWTIPKSVLSATSNYGAVTRHYQFDIRLKNITRLCHTKNVVTVNGKFPGPRVIAREGDRLVVKVINHVPNNITIHWHGVRQLRSGWSDGPSYITQCPVQSGQSYMYNFSLVGQRGTLFWHAHHSWLRATLYGPLIILPRSNESYPFAKPYKEVPILFGEWWNVDPEAVIAQALHTGGGPNVSDAYTMNGLPGPLYNCSSDDTFNLKVKPGKTYLLRLINAAVNNELFFSIANHTMTVVEADAAYVKPFNSDIIVIGPGQTTNVVLKTKPEYINATFFMLARPFFNGKGTFDNSKLAGILKYENNDNDNPPSEPDLKNRTLLKPTLPAFNDASFVANFSRKFRSLNSAEYPANVPQRVDRSFFFTIGLGSIPCPRNQTCEGPNKRTKFAASMNNISFNLPSVAILQQHFSGQDNSVYTTDFPVVPLRPFNYTGTPPNNTMVKSGTKVVAIPYNTRVQVVLQDTSILGAESHPLHLHGFNMFVVGQGFGNFDPMTDPLNFNLVDPVERNTIGVPSAGWVAIRFLADNPGVWLMHCHIDLHLSWELRMAWIVNNGKLSHQKLPPPPSDLPKC* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1505 590 Gene3D - 396 590 IPR008972 -
Pvu5g1505 590 Pfam Multicopper oxidase 173 325 IPR001117 -
Pvu5g1505 590 Pfam Multicopper oxidase 49 161 IPR011707 GO:0005507
Pvu5g1505 590 PANTHER LACCASE-17 29 590 - -
Pvu5g1505 590 CDD CuRO_1_LCC_plant 43 159 IPR034288 GO:0005507
Pvu5g1505 590 Pfam Multicopper oxidase 450 573 IPR011706 GO:0005507|GO:0016491
Pvu5g1505 590 SUPERFAMILY Cupredoxins 167 365 IPR008972 -
Pvu5g1505 590 Gene3D - 25 159 IPR008972 -
Pvu5g1505 590 CDD CuRO_2_LCC_plant 174 322 IPR034285 -
Pvu5g1505 590 SUPERFAMILY Cupredoxins 37 186 IPR008972 -
Pvu5g1505 590 SUPERFAMILY Cupredoxins 375 590 IPR008972 -
Pvu5g1505 590 TIGRFAM laccase: laccase 39 590 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pvu5g1505 590 CDD CuRO_3_LCC_plant 436 573 IPR034289 GO:0005507
Pvu5g1505 590 Gene3D - 171 368 IPR008972 -
Pvu5g1505 590 PANTHER MULTI-COPPER OXIDASE 29 590 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1505 Pvu-Chr5 37420476 37422840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1505 K05909 - gmx:100811833 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1505 5 37420476 37422840 Pvu11g0643 11 5436334 5439649 PCT