Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0643 ATGCAGCTAATTGTGATTAATATTTCCAAACTCACCCACTCAGGCCTAAAACACGATATTGGTGCAAGCAGAGACAAAATGGTCACAGCTGTTCCTTCATCACCAACACTTTTTGTGGCGTTCCTCTTTGTCACAAGCTTCCTTGTTCTCGCCACTAGTTCAAAGCATGGAAGCGTTACAAGGCACTACAAGTTTGATATAAGGTTGAGAAATGTTACGAGGCTGTGCCACACAAAGAGCATTGTTACAGTGAACGGAAAGTTCCCTGGTCCTAGAGTTGCTGCAAGAGAAGGTGACAGAATTGTGGTTAAGGTGGTCAATCATGTTCCGAACAATGTCACCATACACTGGCATGGAGTGAGACAGCTTCGAAGTGGATGGGCAGATGGCCCATCTTACATAACTCAGTGTCCCATTCAAACTGGCCAGAGTTATGTGTACAACTTCACCATTGATGGACAAAGAGGAACCCTCTTCTGGCATGCTCACATCTCATGGTTAAGAGCCACTCTCTATGGACCTCTTATCCTCCTCCCTAGGAGCAATGAATCTTACCCATTTGAAAACCCGTACAAGGAAGTTCCCATTCTCTTTGGTGAGTGGTGGAACGCAGATCCAGAGGCTGTTATTGCACAAGCCCTTCAGTCAGGGGCTGGTCCAAATGTTTCAGATGCCCACACCTTTAACGGATTTCCTGGACCCCTCTACAATTGCTCCAATAACGAGACAGAGACAGAGACGTTCAGGTTAAAGGTGAAACCAGGGAAGACATACCTTCTTCGTTTGATCAATGCTGCACTCAATGACGAGCTCTTTTTCAGCATTGCAAATCACACCCTGGTGATTGTTGAAGCTGATGCTACTTACGTTAAACCTTTTGAGTCCAAGATCATAGTCCTAGGACCGGGACAAACCTCAAATGTTCTGTTGAAGACAAAACCTGAGTACCCAAATGCCACTTTCTTCATGCTAGCAAGGCCATATTTCACTGGCATGGGCACTTTCGACAATTCCACAGTTGCTGGCATTCTAGAGTACAAGAAGCCACTTGCTCCCAAAAACATTCCCACTTTTAAACCCTCCCTTCCAGCCATCAACGACACTTCCTTCGTTGCCAACTTCTCAAGCAAATTTCGCAGTTTGAACACTGCCAAGTACCCTGCCAAGGTACCTCAAAAAGTTGACAAGAGCTTTTTCTTCACGGTTGGACTTGGAACAAGTCCCTGCCCCAAAAACCAAACATGCCAAGGACCAAACAACAGTTCAAAATTTGCAGCCTCGATGAACAATATATCTTTCACTCTTCCTTCTGTAGCACTTCTTCAGCAACATTTCTTTGGGCAGGCTAATAACGGCATTTACACCACTGATTTTCCTGCTGTGCCACTGAGGACATTCAACTACACGGGGACCCCACCTAACAACACAAGGGTCACCAATGGAACCAAGACTGTGGTCATACTCTTTAACACAAAGGTGCAAGTGGTGCTTCAGGATACTAGCATTTTAGGAGCTGAGAGCCACCCTTTGCACCTTCATGGCTTTAATTTCTATGTCGTGGGTCAAGGCTTTGGGAACTTTAATCCCATCACTGACCCTCCAAACTTCAATCTGGTTGACCCCGTTGAAAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGGTTGCAATCCGATTTCTTGCTGACAACCCAGGTGTGTGGCTGATGCACTGTCACTTTGATGTGCACCTTAGTTGGGGGTTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTCCCTAATCAGAAGTTGCCTCCTCCACCAGCTGATCTGCCCAAGTGTTGA 1824 0.4633 MQLIVINISKLTHSGLKHDIGASRDKMVTAVPSSPTLFVAFLFVTSFLVLATSSKHGSVTRHYKFDIRLRNVTRLCHTKSIVTVNGKFPGPRVAAREGDRIVVKVVNHVPNNVTIHWHGVRQLRSGWADGPSYITQCPIQTGQSYVYNFTIDGQRGTLFWHAHISWLRATLYGPLILLPRSNESYPFENPYKEVPILFGEWWNADPEAVIAQALQSGAGPNVSDAHTFNGFPGPLYNCSNNETETETFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVIVEADATYVKPFESKIIVLGPGQTSNVLLKTKPEYPNATFFMLARPYFTGMGTFDNSTVAGILEYKKPLAPKNIPTFKPSLPAINDTSFVANFSSKFRSLNTAKYPAKVPQKVDKSFFFTVGLGTSPCPKNQTCQGPNNSSKFAASMNNISFTLPSVALLQQHFFGQANNGIYTTDFPAVPLRTFNYTGTPPNNTRVTNGTKTVVILFNTKVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNPITDPPNFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPADLPKC* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0643 607 ProSitePatterns Multicopper oxidases signature 1. 565 585 IPR033138 -
Pvu11g0643 607 SUPERFAMILY Cupredoxins 387 607 IPR008972 -
Pvu11g0643 607 CDD CuRO_2_LCC_plant 194 346 IPR034285 -
Pvu11g0643 607 CDD CuRO_1_LCC_plant 63 179 IPR034288 GO:0005507
Pvu11g0643 607 Pfam Multicopper oxidase 70 180 IPR011707 GO:0005507
Pvu11g0643 607 Pfam Multicopper oxidase 469 590 IPR011706 GO:0005507|GO:0016491
Pvu11g0643 607 PANTHER LACCASE 35 607 - -
Pvu11g0643 607 TIGRFAM laccase: laccase 60 607 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pvu11g0643 607 CDD CuRO_3_LCC_plant 453 590 IPR034289 GO:0005507
Pvu11g0643 607 ProSitePatterns Multicopper oxidases signature 2. 570 581 IPR002355 GO:0005507
Pvu11g0643 607 PANTHER MULTI-COPPER OXIDASE 35 607 IPR045087 -
Pvu11g0643 607 Gene3D - 48 178 IPR008972 -
Pvu11g0643 607 Gene3D - 191 384 IPR008972 -
Pvu11g0643 607 SUPERFAMILY Cupredoxins 58 206 IPR008972 -
Pvu11g0643 607 Gene3D - 411 607 IPR008972 -
Pvu11g0643 607 SUPERFAMILY Cupredoxins 188 380 IPR008972 -
Pvu11g0643 607 Pfam Multicopper oxidase 193 348 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0643 Pvu-Chr11 5436334 5439649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0643 K05909 - gmx:100811833 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1505 5 37420476 37422840 Pvu11g0643 11 5436334 5439649 PCT