Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1495 ATGGGTAGCCCCGAGAAGAATGACAACAAGGGATTTTTTTCCGCCATGACTTCCGGCTTCTCCGTCTTCAGCAATGCTATGCACCGATCTGTAAACGGTTTGCTGGGATATGAAGGGGTAGAAGTTATAAATCCGGAGGGTGGTAAAGAGGATGCAGAGGAGGAAGCCCAGAGAGGAAGATGGAAACCTGAGGAAAGAGATGGTTACTGGAAGATGATGCATAAATATATTGGCTCAGATATAACATCAATGGTAACGCTACCTGTTATTATTTTTGAACCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATACATGTGAGGACCCTTGCATGAGGATGGTGTATGCATCATCGTGGGCTATATCTGTGTACTTTGCATACCAACGGACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCACCATCCCCCGATGAGTGCTGGCCATGCTGAGAATGAACATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCCGTTGGAAGAACACGTGTAACCCTCAAGAAGGATGCTGTAGTCATAGATTTGGTTCCCCCTCCAACCAAGGTTAATAATTTGATATTTGGACGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAACATGACAACAGGGGACAAAGTTGTACTCTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCAGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAATTGTTAGAGGTTTGGCATGTTGCTGATATTCCAACAAATGATAAATTCGACTATACATTCTTTGCGCATAAATTAAACAGCTTTGACACTGCTCCTAGAAATTTGTTAGCATCAGACTCCCGTTTACGCCCAGATAGATTTGCACTTGAGATGGGTGATCTATCCAAATCAGGGACAGAAAAGAGCAGTTTGGAGGAGAGGCAACGAGCTGAAAAGAAGATCAGAGAAGCCAAAGAGCATAAATTTGCACCAAGATGGTTTGATTTGACTGAAGAAGTCACATCAACTCCATGGGGTGATTTGGAGATCTACCATTACAATGGTAAATACACTGAGTATCGAACTGCTATTGGTAACCCAGACAACATTGATCATGTTGATAACAAAGAAATTCCATTCAATCCATGGCAGTATGTTAATTTGTCCACAGAATGA 1371 0.4187 MGSPEKNDNKGFFSAMTSGFSVFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGRWKPEERDGYWKMMHKYIGSDITSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADTCEDPCMRMVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKDAVVIDLVPPPTKVNNLIFGRTWIDSPGEMIMTNMTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTELLEVWHVADIPTNDKFDYTFFAHKLNSFDTAPRNLLASDSRLRPDRFALEMGDLSKSGTEKSSLEERQRAEKKIREAKEHKFAPRWFDLTEEVTSTPWGDLEIYHYNGKYTEYRTAIGNPDNIDHVDNKEIPFNPWQYVNLSTE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1495 456 SUPERFAMILY Oxysterol-binding protein-like 62 435 IPR037239 -
Pvu5g1495 456 Gene3D - 150 321 - -
Pvu5g1495 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Pvu5g1495 456 Coils Coil 372 392 - -
Pvu5g1495 456 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Pvu5g1495 456 Gene3D - 359 441 - -
Pvu5g1495 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Pvu5g1495 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1495 Pvu-Chr5 37330430 37336201 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1495 - - gmx:100779808 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1495 5 37330430 37336201 Pvu5g1495 5 37330430 37336201 ECH
Pvu5g1495 5 37330430 37336201 Pvu11g0652 11 5500645 5505587 PCT