Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0652 ATGGGCAGCCCCTCGAAGAAGAATGAAAGTAAGGGGTTTTTCGCCGCCATGTCTTCCATCTTCACCGATGCTATGCACCGATCAGTCAACGGGCTTCTTGGATATGAAGGTGTGGAAGTTATTAATCCAGAGGGAGGTAAAGAAGACGCAGAGGAGGAAGCACAAAAAGGAAGATGGAAACAAGAGGAAAGAGATGGTTATTGGAAGATGATGCAGAAATATATTGGCTCCGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAACCGATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTAGATCAAGCAGATGAATCAGAGGATCCATACATGCGGTTAGTCTACGCAACATCATGGGCTATATCTGTGTACTTCGCTTTCCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAATTGGCTAATCATGGCGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAATTTTTGGGAAATTCTGTTGATGTTTACCCTATTGGAAGAACACGTGTGACTCTTAAGAGAGATGGTGTAATCTTGGATCTGGTGCCACCTTCTACAAAGGTTAACAACCTCATATTTGGCCGGACTTGGATTGATTCGCCTGGGGAAATGATAATGACAAATCTGACAACTGGAGATAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCTGGTCGATATGAAGTGGATGGGTATATCTATAATTCTTCCGAGGAGCCTAAAATATTAATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCCTGTGATTCAGAAGGAGAGCCTCTCCCAAACACAGAATTGAAAGAGGTTTGGCATCTTGCTGATGTTCCAAAGAATGACAAATTTCAGTATACGTATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGGAAGTTGTTGGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCTGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAAAACGCGAGAGGAAAAAGGGCATAAGTTCGTGCCTAGATGGTTTGATTTAACTGAAGAAGTGACAACAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACACTGAACATCGGGCTGCTGCAGATGACATGGGAAGCATTGATGATTGTGATGTTAAAGCAATTGAATTCAATCCATGGCAGTATGGTAATTTGGCCACGGAATGA 1365 0.4212 MGSPSKKNESKGFFAAMSSIFTDAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQKGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAFQRTWKPFNPILGETYELANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPIGRTRVTLKRDGVILDLVPPSTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHLADVPKNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKKTREEKGHKFVPRWFDLTEEVTTTPWGDLEIYQYNGKYTEHRAAADDMGSIDDCDVKAIEFNPWQYGNLATE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0652 454 Gene3D - 147 325 - -
Pvu11g0652 454 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 451 - -
Pvu11g0652 454 ProSitePatterns Oxysterol-binding protein family signature. 164 175 IPR018494 -
Pvu11g0652 454 Gene3D - 356 437 - -
Pvu11g0652 454 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 451 IPR000648 GO:0008289
Pvu11g0652 454 Pfam Oxysterol-binding protein 67 424 IPR000648 GO:0008289
Pvu11g0652 454 SUPERFAMILY Oxysterol-binding protein-like 61 427 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0652 Pvu-Chr11 5500645 5505587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0652 - - gmx:100810228 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1495 5 37330430 37336201 Pvu11g0652 11 5500645 5505587 PCT