Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1484 ATGTCAGTCCTGTTGAACAAAAAAATGGGCACACCTTTGTTCCATGATTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACTGCTAGGTTAGCTCTCACTGATGTTACTCCAGCAGAACTCATGACAGAAGAAGTTACCAAAGGAAATCCATGGGCCCCAGATTCTCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTTGAAGATTATTGGAGGATTGTAGAGATTCTCCACAAAAGACTCCTTAAATTTGAGAAGAAGAATTGGAGGGCATCTTACAATTCTCTGATTGTGGTGGAGCATCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAGATTGACAAAGAAGTAATTAGCCAGATGAAAGGCTTTCAGTATAGTGATGACAGTGGGTTCAACTGGGGTCTAACTGTTAGAGAGAAATCAGAACGGATTTTGAAACTCCTGGAAGAAGGAACTCTCCTTAAGGAGGAAAGAAACCGTGCTCGGAGGTTGTCCAGAGGAATTCAAGGTTTTGGAAGTGTCAGCCAAAGGTCAACTCAAGCACAAGGAGTTCTGCAAGAAAAAGCTTTGCCAACCATATTTGACAGATCTAACTCTGACTTCAACAACAATCACTATCAGGAAAACCAGTCATTTGGCTCAAACCATTTTCTGGACACAGCAGCAGCTAAATCTCTTAGTCCTGGTCATGAGAGAGGAATTTTCAAGTCTCAAGATGGTGTAGAGCCTGAGAACTACTTGGATGATCAGGGAAAAGCTCAAATTTATCAGAAATCGGAGACACCTAGCAAGAAGGAATTCCATCTATGGAACTTGAAAGGGGAATCCAATCCACTTTTGGATGGTAACCAAGAGAATGATTCCAGACTTAGTATATTCACAGCCGAAGATGATCACCCCTTTAACCCCAAAGAAATTCATTCCTCTTCTTCCCTTCTTCCTTGTGGATGA 978 0.4141 MSVLLNKKMGTPLFHDFKKQASFFLKEKFKTARLALTDVTPAELMTEEVTKGNPWAPDSPTLRSISRAAFELEDYWRIVEILHKRLLKFEKKNWRASYNSLIVVEHLLTHGPESVAEEFQIDKEVISQMKGFQYSDDSGFNWGLTVREKSERILKLLEEGTLLKEERNRARRLSRGIQGFGSVSQRSTQAQGVLQEKALPTIFDRSNSDFNNNHYQENQSFGSNHFLDTAAAKSLSPGHERGIFKSQDGVEPENYLDDQGKAQIYQKSETPSKKEFHLWNLKGESNPLLDGNQENDSRLSIFTAEDDHPFNPKEIHSSSSLLPCG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1484 325 SUPERFAMILY ENTH/VHS domain 20 167 IPR008942 -
Pvu5g1484 325 Pfam ENTH domain 40 161 IPR013809 -
Pvu5g1484 325 Gene3D - 36 183 IPR008942 -
Pvu5g1484 325 ProSiteProfiles ENTH domain profile. 34 167 IPR013809 -
Pvu5g1484 325 PANTHER EPSIN/ENT-RELATED 12 322 - -
Pvu5g1484 325 CDD ENTH 42 158 - -
Pvu5g1484 325 SMART enth_2 40 167 IPR013809 -
Pvu5g1484 325 PANTHER EPSIN-2-LIKE 12 322 - -
Pvu5g1484 325 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1484 Pvu-Chr5 37238268 37240171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1484 K12471 - gmx:100812797 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1484 5 37238268 37240171 Pvu11g0660 11 5583522 5585398 PCT