Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0660 ATGAGCACGCCCTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTACCTCAAGGAAAAAATCAAAACTGCTAGATTAGCTCTAACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACTAGTGGAAATCCTCTAGATTCCAGAACTCTCCGATCAATTTCAAGGGCTGCTTTTGAGTTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGTTCCTGAAATTTGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAGCACCTGTTGACTCATGGACCAGAGAGTGTTGCAGAGGAATTTAAGAGTGACAAAAATGTTATCAGCCAGATGAGAAGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGGCTAACTGTCAGAAAGAAATCAGAGAGGATAGTGAATCTGCTGGAGGAAGTAACTGTTCTAAAGGAAGAGAGAAAACAAGCTAGAAGGTTATCTAGAGGAATTGAAGGTTTTGGAAGTTTTTCCCATCGGTCAACTCCAGCACAAGGAATTCTACGTGAGAAATCAATGCCAATCACACTCAGGAGATATGACTCGGACTTGAATAACCATGAAGATCAGGAAAACAAGTCCTCTTGTTCTAACAATGGTGTGGATGTGGACACAGTAGCTGTGAAATCTCCTGGCCATCAAGGTGGAACTTTCGAGTCCTTGGATAGTGTGGAAGCCAAGGGATACCAGAATGATCTAGGCAACAGTCAAATGCTTCAGAAATCTGAAGCAAATGCTAAAGAAAACAAGGACCCTAGTAAGGAGGAGTTCCATCTATGGAACATGAAAGGGGAGTCCAAATCCCTTTTGGATAGTGGCGAAGAAGATTCCAGGCTTGGAATCATCAAAACAGAAGATGATCACCCCTTTAATTCTACTGAATTGCATGGCACTGCCTCCTTGCTTTCTGCTAGAGAGGGAATACTACAAGGGTGTTGA 987 0.4215 MSTPLFHEFKKQASFYLKEKIKTARLALTDVTPAELMTEEATSGNPLDSRTLRSISRAAFELDDYWRIVEILHKRFLKFEKKNWRVSYNSLIVLEHLLTHGPESVAEEFKSDKNVISQMRSFQYIDDTGFNWGLTVRKKSERIVNLLEEVTVLKEERKQARRLSRGIEGFGSFSHRSTPAQGILREKSMPITLRRYDSDLNNHEDQENKSSCSNNGVDVDTVAVKSPGHQGGTFESLDSVEAKGYQNDLGNSQMLQKSEANAKENKDPSKEEFHLWNMKGESKSLLDSGEEDSRLGIIKTEDDHPFNSTELHGTASLLSAREGILQGC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0660 328 CDD ENTH 34 148 - -
Pvu11g0660 328 ProSiteProfiles ENTH domain profile. 23 157 IPR013809 -
Pvu11g0660 328 SMART enth_2 32 157 IPR013809 -
Pvu11g0660 328 PANTHER EPSIN/ENT-RELATED 4 320 - -
Pvu11g0660 328 MobiDBLite consensus disorder prediction 201 234 - -
Pvu11g0660 328 Gene3D - 28 173 IPR008942 -
Pvu11g0660 328 Coils Coil 136 163 - -
Pvu11g0660 328 PANTHER EPSIN-2-LIKE 4 320 - -
Pvu11g0660 328 SUPERFAMILY ENTH/VHS domain 12 157 IPR008942 -
Pvu11g0660 328 Pfam ENTH domain 32 150 IPR013809 -
Pvu11g0660 328 MobiDBLite consensus disorder prediction 248 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0660 Pvu-Chr11 5583522 5585398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0660 K12471 - gmx:100811093 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1484 5 37238268 37240171 Pvu11g0660 11 5583522 5585398 PCT