Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1474 ATGACTGAGGATAAAGCATACAAAAATCCGCTAATTGAATTTCATCCTAAAAGTTTCGTTAAGAGAAACCATGAATATCTCATTTTGCTGCTCCGTGGCTGCTTTGGAAGCAGTGTTGTGGGTCGTACCACATTTTTTTTAGTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGAACAGATGTCCATTTATATGGCGAGGCCTTCAGTCTCTACAAATCCTGTGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTTGACAGCATGCAGGTCCTATCAAGACCTTTGCTAGCCCTTTCAATTGCAACATTGTTTTCTGATAAGTCAATTGCAATGTTGACTTCTGATAAATCAAAATGTAGTGATAGAAAGTCAGATTGTAGTTCAGAAGATGCAGCTGTATACTCTGAATTATCTCCTTTACAGGTTGATTTGAATATAAGCCAGTGTTTGACAAATCCTAAAATTTTAGAATCTGAGAAGTGGCTGACTCAACTCAATCAGGAGCTTGAAAATCAAGGACTTAGTTTACCAGAAAGAATCAATGATGACGAGCTTAGGAGATTTTATGCAGCTTCTAATAATGATTTTTCATGCTTCCTTGCCTCAATAAAGAAGACCATACGATGGCGAGAGACTTACAGAATTCTCTCTGAGGAAGAACAGAAAAGGTGGACAAAAGTGGTTTTTTGGCATGGGTGTGACGTGGAGCACAGACCTTGCCTAATAGTAAGGCTCGGATCAGCCTGCAATACTTTGTCACCGGAAGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTGGAATATGGAGTCTTGCACTTGGTTGATGCAGACAACCCTCATATTACAGTGTTGGTGGACTGTGATGGGTTATCTCCAGTGAGAATTCCCATGCAAATAATGAGATCTTGTTCTTCCCTTCTGCTAGACCACTTTCCCAATCGTCTTGGTTGCATGTTTGTCATACAACTTTCAGCCAGTGTTCATGCTATTGCCCGGTCTTTTATTCAGGATCTGAAGCCTGCTACTAGAAACAAGTTGAAAATAGAAGGCGAAATGTATCAGAAAGTTCTTTCTGACTCTCTATCGACACTGCCTTCATATCTTGGAGGCTGCTGCACTTGCATGAAATGCTCCACCATTGGCCAACAGGATATGCAACCTTATGCAACTGGGACCAGCAGGAGAGACAGGGTGGAGGACACCAGTGACAATGACAGTGAGGAGCCTCCAATGTTGCATCCTTCCAATGAATTAGAAGGCCGCTTTTATGGTCAATATGACCATTTGTTGAGAGCTGCTATCGTAGGTATGCTTATATTTTGGGCTTTTGTGGCCCTTGGTTCTGTAGTATTTGATTCCAGTGATCTTCACCTGCCCTGA 1416 0.4195 MTEDKAYKNPLIEFHPKSFVKRNHEYLILLLRGCFGSSVVGRTTFFLVKVAALEIIRRFSKNRCPFIWRGLQSLQILCYPPFKWIQRWAPFKGLVDSMQVLSRPLLALSIATLFSDKSIAMLTSDKSKCSDRKSDCSSEDAAVYSELSPLQVDLNISQCLTNPKILESEKWLTQLNQELENQGLSLPERINDDELRRFYAASNNDFSCFLASIKKTIRWRETYRILSEEEQKRWTKVVFWHGCDVEHRPCLIVRLGSACNTLSPEDRPRFAQAVISQVEYGVLHLVDADNPHITVLVDCDGLSPVRIPMQIMRSCSSLLLDHFPNRLGCMFVIQLSASVHAIARSFIQDLKPATRNKLKIEGEMYQKVLSDSLSTLPSYLGGCCTCMKCSTIGQQDMQPYATGTSRRDRVEDTSDNDSEEPPMLHPSNELEGRFYGQYDHLLRAAIVGMLIFWAFVALGSVVFDSSDLHLP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1474 471 SMART sec14_4 232 385 IPR001251 -
Pvu5g1474 471 Gene3D - 166 418 IPR036865 -
Pvu5g1474 471 MobiDBLite consensus disorder prediction 405 426 - -
Pvu5g1474 471 MobiDBLite consensus disorder prediction 398 428 - -
Pvu5g1474 471 CDD SEC14 228 382 IPR001251 -
Pvu5g1474 471 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 226 388 IPR001251 -
Pvu5g1474 471 Pfam CRAL/TRIO domain 235 382 IPR001251 -
Pvu5g1474 471 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 3 466 - -
Pvu5g1474 471 SUPERFAMILY CRAL/TRIO domain 235 387 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1474 Pvu-Chr5 37144798 37148810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1474 - - var:108332471 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1474 5 37144798 37148810 Pvu5g1474 5 37144798 37148810 ECH
Pvu5g1474 5 37144798 37148810 Pvu11g0673 11 5704837 5711688 PCT