Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0673 ATGGGAGATAGAGTGGATAATTCTACCTCGAGCATGGGAACTAATTCTAAGGAAAGCAGTGTTATCACTGGGAAAAATACATACAAAAACCTTCTGGTTGCATCACGGCCTAAAGGCTTTGCACAGAGAAACTATGAACAACTTGTGTCATTAACCCATGGTGACTTTGGAAGCAGTGTTGTGGGTCGTGCCACTTTTTTTTTACTCAAAGTTGCTGCATTAGAGACCGTGAGGAGGTTCTCCAAGAGTAAATGCCCGTGTGTATGGCGAGGCCTGCAGGGTCTACAAATCCTTGTCTATCCACCTTTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTTTGGTGAAGAGCATGCAGGTACTTTCAAGACCACTTTTAGTGCTTTCGATTGCAACAGTCTTTACTGATCAACCACAATGTAGTGATGGAACATCCGACTGTGTTTCTGATCCTGATTCTGAAGTATCTGCCGAACAATCTCCTGCACAGCCTATCTTGAATACAAGTCATTGTGAGATAGATCCTGAAGTTTTAGAATATGAAAACTGGTTGACTCTACTTAATCAAGAGCTGCAAAATCAAGGGATTAGTTTGCCGGAAAGAATCAATGATGATGAGCTCCACAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACGGTGGCGGGAGAGTTACCGATTTCTTTCAGGAGAAGAGCTGGAAATGTGGTCAAATATGGTGTTCTGGCATGGATTTGATGTTTTGAACAGACCTTGCCTCATTGTAAGGCTTGGGATAGCTTGTCGCTCTTTGGCGTCTGAAGATAGACTTCAGTTTGCTCAGGCAGTTATATCACAGGTAGAATACGGAGTCTTGCACTTGGTAGATGCAGACAACCCTCAAATTGCAGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGAAAGTGATGAGATCTTGTTCCTCCCTTCTGCAAGATTACTTTCCTAATCGACTTGGTTGTTTGTTTGTCATCCGACTGCCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTTTAAAGCCAGCTACTAAGAAGAAGTTGAAATTAGGGGGAGAGATGTTTCGGAAAGCACTTTTTGACAATTTTCCGACACCACCATCATATCTTGGAGGAAGATGCACTTGCATGAGATGTTCTAAAATTGGCAACTGGGGTATGCTGCAACCTCATTCAACTGGGACAAGCAGAATTGATAGGGAGCAGGAGATCAGTGACAATGGGGGTTTTCCATCACCGCCGTCTAATGAGTTAGATGACCGCCAAGTCAGCAATTCTGACCAGCTGTTGAAAAAGGCTGTCATAAGTTTTCTAGTATTTTGGGTTTTCATAGCTCTTGGTGCTGGAATTTACGATCCTAGTAGTCGTCATTTAGCCCCATAA 1452 0.4298 MGDRVDNSTSSMGTNSKESSVITGKNTYKNLLVASRPKGFAQRNYEQLVSLTHGDFGSSVVGRATFFLLKVAALETVRRFSKSKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDQPQCSDGTSDCVSDPDSEVSAEQSPAQPILNTSHCEIDPEVLEYENWLTLLNQELQNQGISLPERINDDELHRFYAASNNDFSCFLTSIKKTIRWRESYRFLSGEELEMWSNMVFWHGFDVLNRPCLIVRLGIACRSLASEDRLQFAQAVISQVEYGVLHLVDADNPQIAVLVDCEGLSPLRIPMKVMRSCSSLLQDYFPNRLGCLFVIRLPAIVRVIAQTFIQVLKPATKKKLKLGGEMFRKALFDNFPTPPSYLGGRCTCMRCSKIGNWGMLQPHSTGTSRIDREQEISDNGGFPSPPSNELDDRQVSNSDQLLKKAVISFLVFWVFIALGAGIYDPSSRHLAP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0673 483 Pfam CRAL/TRIO domain 249 384 IPR001251 -
Pvu11g0673 483 SUPERFAMILY CRAL/TRIO domain 246 400 IPR036865 -
Pvu11g0673 483 SMART sec14_4 245 398 IPR001251 -
Pvu11g0673 483 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g0673 483 CDD SEC14 242 372 IPR001251 -
Pvu11g0673 483 MobiDBLite consensus disorder prediction 425 446 - -
Pvu11g0673 483 Gene3D - 180 430 IPR036865 -
Pvu11g0673 483 MobiDBLite consensus disorder prediction 431 446 - -
Pvu11g0673 483 MobiDBLite consensus disorder prediction 139 161 - -
Pvu11g0673 483 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 253 401 IPR001251 -
Pvu11g0673 483 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 11 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0673 Pvu-Chr11 5704837 5711688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0673 - - gmx:100814843 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1474 5 37144798 37148810 Pvu11g0673 11 5704837 5711688 PCT