Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1472 ATGGCAACGGATTCTTCTAATGGTAATGGACATCACGAGACGACAACAACAAAGAAACCTCCTTCACCATCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGGTCTCACTTAGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATCGTTGCTGACAACTACTTCACTGGATCCAAAGATAACCTCCAAAAATGGATTGGCCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTGAAGACTATAAAGACAAATGTGATAGGCACCATGAATATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGAGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTCCGTAGTTGTTATGATGAGGGGAAACGGGTGGCTGAGACTTTGATGTTTGATTACCATAGGCAGCATGGACTTGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGCCGTGTTGTTAGCAACTTCATTGCTCAAGCACTTCGGGGGGAACCCTTGACAGTCCAATGTCCAGGAACACAAACTCGAAGTTTCTGTTATGTCACTGACCTGGTTGATGGCCTTATCCGCCTCATGGAAGGGACGAACACTGGGCCAATCAACCTCGGAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACTGTGAAAGAGCTTATCAATCCAGATGTTGAGATCAAGATGGTGGAGAACACTCCTGATGATCCGAGACAAAGAAAACCAGACATAACAAAAGCAAAAGAATTGTTGGGGTGGGAGCCAAAGGTGAAGTTGAGGGATGGTCTTCCTCTTATGGAAGAGAATTTCCGTCTGAGGCTTGGAGTTGGCAAAAAGAATTAA 1050 0.4381 MATDSSNGNGHHETTTTKKPPSPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLQKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVTDLVDGLIRLMEGTNTGPINLGNPGEFTMTELAETVKELINPDVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEENFRLRLGVGKKN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1472 349 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 349 IPR044516 GO:0042732|GO:0048040|GO:0070403
Pvu5g1472 349 CDD UGD_SDR_e 36 340 - -
Pvu5g1472 349 MobiDBLite consensus disorder prediction 1 25 - -
Pvu5g1472 349 Gene3D - 164 343 - -
Pvu5g1472 349 Gene3D - 33 163 - -
Pvu5g1472 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 340 IPR036291 -
Pvu5g1472 349 Pfam GDP-mannose 4,6 dehydratase 39 333 IPR016040 -
Pvu5g1472 349 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1472 Pvu-Chr5 37126210 37130351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1472 33 332 Miscellaneous Gene Families AT1G02000 24.776 8.23e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1472 K08678 - gmx:100790835 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1472 5 37126210 37130351 Pvu5g1472 5 37126210 37130351 ECH
Pvu5g1472 5 37126210 37130351 Pvu11g0675 11 5721965 5726662 PCT
Pvu11g0674 11 5714803 5720200 Pvu5g1472 5 37126210 37130351 PCT