Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0674 ATGGCAACGAGTTCTTCCAATGGAGCAGCAAAGCAACCTCCCATGCCATCTCCCTTGCGTTTTTCCAAGTTTTTTCAGTCCAATATGAGAATTCTGGTTACCGGAGGAGCTGGATTTATTGGCTCTCACTTAGTTGACAGACTGATGGAAAATGAAAAAAATGAGGTTGTTGTTGCTGACAATTTCTTCACTGGATCTAAAGACAACCTTAAAAAATGGATTGGCCATCCAAGATTCGAGTTAATTCGCCATGATGTCACAGAGCAATTGTTGATTGAGGTTGATCAAATCTATCATCTTGCTTGTCCTGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACAAATGTGATTGGAACACTGAACATGCTTGGGCTCGCTAAGCGAGTGGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGATCCTCTTGTGCATCCACAACCAGAAAGCTACTGGGGCAATGTTAACCCAATTGGAGTTCGGAGTTGTTATGATGAGGGCAAGCGTGTTGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGTATGAATATTGATGATGGTCGTGTGGTCAGCAACTTCATTGCTCAAGCAATTCGTGGTGAACCCTTAACTGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGACTTATACGCCTGATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAATTTACAATGACTGAACTTGCCGAGAATGTGAAAGAGCTTATTAATCCAGCAGTGGAGATAAAGATGGTTGAGAACACTCCTGATGATCCTCGTCAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTGGGATGGGAACCAAAGATCAAGTTGCGTGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGGGTTCCCAACAAAAACTAA 1029 0.4227 MATSSSNGAAKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVVVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKIKLRDGLPLMEEDFRLRLGVPNKN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0674 342 CDD UGD_SDR_e 29 333 - -
Pvu11g0674 342 Gene3D - 28 335 - -
Pvu11g0674 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 333 IPR036291 -
Pvu11g0674 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
Pvu11g0674 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
Pvu11g0674 342 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0674 Pvu-Chr11 5714803 5720200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0674 1 325 Miscellaneous Gene Families AT4G00110 23.889 2.49e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0674 K08678 - gmx:100819843 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0674 11 5714803 5720200 Pvu5g1472 5 37126210 37130351 PCT