Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1448 ATGGAGTTCCTCATATTACTTTATGGTGCAACAACACTGTACTTGTGTTTCCTGATCTGGAAATTGTTTGATCAGAGAAGGGACCAAGAGTGTTACATATTGGAGTACCAACTGTACAAGCCAAAGGATGAAAGTAAGCTTGGAACTGAATGTTGTGGCAGGATCATAGAGAGGAACAAGCATTTGGGTCTGAATGAGTACAAGTTCCTCCTCAAAGCCATTGTGAACTCTGGCATTGGTGAGGAAACTTATGCCCCAAGCAACGTCATCGAGGGTCGTGAGGCAACTCCAACACTGAACGATGGTGTCACAGAAATGGAGGAGTTTTTTAATGACAGCATTGCCAAGCTCCTTGCAAGGTCAGGCATTTCCCCCTCACAGATCGATGTGCTTGTGGTGAATGTCTCTATGTTCTCCATTGCTCCTTCCTTGACTTCAAGAATCATAAACCACTACAAAATGAGGGAGGACGTAAAGGCTTACAACCTCACTGGGATGGGTTGCAGTGCTAGCCTCATTTCATTGGACATCATTAGGAGCGTTTTCAAGTCACAAAAGAACAAGTTTGCTCTTTTGGTGACTTCTGAGTCTCTCAGTCCAAACTGGTATAATGGCAACGACAGATCAATGATTCTCGCCAACTGTTTGTTCCGGAGTGGTGGGTGTGTCATACTTTTGACAAACAAAAGATCCTTGAAGAACAGGGCCATGTTGAGGCTCAAGTGTTTGGTGAGGACTCATCATGGGGCAAGAGAAGATGCCTATAGTTGCTGCAGTCAGAAGGAAGATGAGGAAGGGAGGCTTGGGTTTTACCTTGCCAAAAACCTTCCCAAGGCAGCTACAAGAGCCTTTGTTGATAATTTAAGGGTGTTGTCACCCAAGGTTTTGCCAACCAGGGAGTTGCTAAGGTTTATGGTTGTGTTCCTCATCAAAAAACTGAGACAACCTAGTTCCTCCCTTAAGTCTTCAAGTGTTGGATCTAATAAATCCAACAAATCTCCTTTGAACTTCAAGACTGGGATTGAACATTTTTGCCTCCACACAGGAGGAAAAGCTGTGATTGATGGCATTGGAATGAGCTTAGATCTGTGTGAATATGACCTTGAGCCAGCAAGAATGACACTCCACAGGTTTGGGAACACTTCTGCTAGTAGCCTGTGGTACGTGCTGGGTTACATGGAGGCCAAAAAGAGGCTCATGAAGGGTGACAGAGTACTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGTTGTTTGTGGGAGGTAATGAAGGATCTGAGGGATCGTCCTAATGTGTGGAACGAATGCATTGATGACTACCCACCAGACTCCTTGGCCAACCCTTTCATGGAGAAGTTTGGTTGGATCAATGATGTTCAAGAAGCAAGCAACTTCAAATTTCCAGCTTCTTTCAAGTAA 1422 0.4444 MEFLILLYGATTLYLCFLIWKLFDQRRDQECYILEYQLYKPKDESKLGTECCGRIIERNKHLGLNEYKFLLKAIVNSGIGEETYAPSNVIEGREATPTLNDGVTEMEEFFNDSIAKLLARSGISPSQIDVLVVNVSMFSIAPSLTSRIINHYKMREDVKAYNLTGMGCSASLISLDIIRSVFKSQKNKFALLVTSESLSPNWYNGNDRSMILANCLFRSGGCVILLTNKRSLKNRAMLRLKCLVRTHHGAREDAYSCCSQKEDEEGRLGFYLAKNLPKAATRAFVDNLRVLSPKVLPTRELLRFMVVFLIKKLRQPSSSLKSSSVGSNKSNKSPLNFKTGIEHFCLHTGGKAVIDGIGMSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLMKGDRVLMISFGAGFKCNSCLWEVMKDLRDRPNVWNECIDDYPPDSLANPFMEKFGWINDVQEASNFKFPASFK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1448 473 Pfam FAE1/Type III polyketide synthase-like protein 25 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu5g1448 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 341 422 IPR013747 -
Pvu5g1448 473 Gene3D - 55 423 IPR016039 GO:0016746
Pvu5g1448 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 - -
Pvu5g1448 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 456 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu5g1448 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu5g1448 473 SUPERFAMILY Thiolase-like 243 424 IPR016039 GO:0016746
Pvu5g1448 473 CDD CHS_like 12 421 - -
Pvu5g1448 473 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1448 Pvu-Chr5 36907431 36908852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1448 19 472 Acyl Lipid Metabolism Gene Families AT2G28630 68.122 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1448 K15397 - gmx:100776947 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1448 5 36907431 36908852 Pvu5g1448 5 36907431 36908852 ECH
Pvu5g1448 5 36907431 36908852 Pvu11g0707 11 5992971 5994706 PCT