Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0707 ATGGAGTTCCTCTATCTACTCTACCTCGTCCCAACGTTGTACTCGTGTTTTCTCATCTGGAAAATGTTGGAGGAGAGACGCGACAGGGAGTGTTACATCCTGGACTACCAATGCTACAAGCCCCCCAACCACCGAATGTTGGGGACTGAGTTCTGTGGGAAACTCATCAAACGCACAGAAAATTTGGGTCCCAGCGAGTACCGTTTTCTGCTCAAGGCCATCGTCAGCTCCGGCATCGGCGAACAAACTTATGCGCCAAGAAACATCTTCGAGGGTCGCGAGGGAGCGCCCACATTGTTCGACGGAATCGAAGAGATGGAAGAGTTCTTCAACGACGCCATCGCCAAGCTCCTTGCGAAATCAAAAGTCTCCCCCTCCGAGATCGACATCCTCGTCGTCAACATCTCCATGCTCGCCGCCGTCCCCTCCCTCTCGTCTCGAATCATCAACCTCTACAAGCTCCGCCATGACGTCAAGGTCTACAACCTCACCGGCATGGGTTGCAGCGCCAGCCTGATCTCCATGGACATTGTCAAAAGCATCTTCAAGACGCAGAGGAACAAGCTGGCGTTGTTGATCACCTCCGAGTCCCTCAGCCCCAACTGGTACACCGGCAGCGACAGATCCATGATCCTCGCCAACTGCTTGTTCCGCACCGGCGGCTGCGCGATTCTCTTGACCAACAAACGGTCTATGAAGGACAGAGCCCTGCTGCGGTTGAAGTGCCTGGTGAGGACGCATCACGGCGCCAGAGAAGAGGCTTACGGTTGCTGTGTTCAGCGGGAAGACGAGCAGGGAAGGCTAGGATTTCACCTTGGGAAGACGCTTCCCAAGGCCGCAACCCGTGCCTTCGTTGATAATCTTCGAGTCATGGCACCCAAGATATTACCTGTCCGTGAGTTGCTGAGGTTTTTGTTCATGTCGCTGATTAAAAAAGTGAACAAAAACAACAGTCCTAAGTCTGCGATCACTGGAGCTACTAAATCTCCGTTGAACTTCAGAACAGGGGTGGATCATTTTTGCTTGCATACCGGAGGAAAAGCTGTGATCGACGGCATTGGATTGAGCTTGGATCTGAGCGAGTACGACCTGGAACCGGCTAGGATGACGCTGCACCGTTTCGGGAACACGTCAGCAAGTAGCTTGTGGTACGTGTTATCGTACATGGAAGCGAAGAAGAGGTTGAAGAAGGGTGACACGGTGTTCATGATAAGCTTTGGTGCAGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTGATGAAGGACCTGGGAGACCCAAATGTGTGGGACGACTGCATTGATGACTACCCACCGGAGTCATTGGAGAACCCCTTCATGAAGACCTACGGTTGGATCAACGAGGTTGAGGACCCCTACACTTACGAAAATATCCCTGAATTTCTCAAGTGA 1410 0.5234 MEFLYLLYLVPTLYSCFLIWKMLEERRDRECYILDYQCYKPPNHRMLGTEFCGKLIKRTENLGPSEYRFLLKAIVSSGIGEQTYAPRNIFEGREGAPTLFDGIEEMEEFFNDAIAKLLAKSKVSPSEIDILVVNISMLAAVPSLSSRIINLYKLRHDVKVYNLTGMGCSASLISMDIVKSIFKTQRNKLALLITSESLSPNWYTGSDRSMILANCLFRTGGCAILLTNKRSMKDRALLRLKCLVRTHHGAREEAYGCCVQREDEQGRLGFHLGKTLPKAATRAFVDNLRVMAPKILPVRELLRFLFMSLIKKVNKNNSPKSAITGATKSPLNFRTGVDHFCLHTGGKAVIDGIGLSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDPNVWDDCIDDYPPESLENPFMKTYGWINEVEDPYTYENIPEFLK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0707 469 SUPERFAMILY Thiolase-like 18 232 IPR016039 GO:0016746
Pvu11g0707 469 CDD CHS_like 19 417 - -
Pvu11g0707 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Pvu11g0707 469 SUPERFAMILY Thiolase-like 243 419 IPR016039 GO:0016746
Pvu11g0707 469 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu11g0707 469 Gene3D - 74 419 IPR016039 GO:0016746
Pvu11g0707 469 PANTHER 3-KETOACYL-COA SYNTHASE 1 458 - -
Pvu11g0707 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu11g0707 469 PANTHER 3-KETOACYL-COA SYNTHASE 1 458 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0707 Pvu-Chr11 5992971 5994706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0707 19 468 Acyl Lipid Metabolism Gene Families AT2G28630 67.538 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0707 K15397 - gmx:100809149 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1448 5 36907431 36908852 Pvu11g0707 11 5992971 5994706 PCT